Information for 9-RCCTYHTCAC (Motif 35)

C T G A A T G C A T G C A C G T A G C T G A T C A G C T G T A C C T G A A G T C
Reverse Opposite:
A C T G A G C T A C T G C T G A C T A G C T G A C G T A A T C G T A C G G A C T
p-value:1e-6
log p-value:-1.401e+01
Information Content per bp:1.756
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.69%
Number of Background Sequences with motif130.5
Percentage of Background Sequences with motif0.27%
Average Position of motif in Targets47.8 +/- 26.4bp
Average Position of motif in Background48.8 +/- 26.6bp
Strand Bias (log2 ratio + to - strand density)1.7
Multiplicity (# of sites on avg that occur together)1.42
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer

Match Rank:1
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:RCCTYHTCAC-
-YCTTATCWVN
 C T G A A T G C A T G C A C G T A G C T G A T C A G C T G T A C C T G A A G T C A C G T
A C G T A G C T A T G C G A C T G C A T C G T A A C G T A G T C C G A T T A C G A T G C

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:RCCTYHTCAC
NCCTTATCTG
 C T G A A T G C A T G C A C G T A G C T G A T C A G C T G T A C C T G A A G T C
A G C T A G T C A T G C A C G T A C G T C G T A A C G T A G T C C G A T A T C G

Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer

Match Rank:3
Score:0.62
Offset:1
Orientation:forward strand
Alignment:RCCTYHTCAC-
-YCTTATCTBN
 C T G A A T G C A T G C A C G T A G C T G A T C A G C T G T A C C T G A A G T C A C G T
A C G T A G C T A T G C G A C T G C A T C G T A A G C T G T A C C G A T A T C G A G T C

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:RCCTYHTCAC
NNCTTATCTN
 C T G A A T G C A T G C A C G T A G C T G A T C A G C T G T A C C T G A A G T C
A G C T A G T C A T G C A G C T A C G T C G T A A C G T A G T C C G A T A T G C

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:5
Score:0.62
Offset:2
Orientation:forward strand
Alignment:RCCTYHTCAC--
--ATTAACACCT
 C T G A A T G C A T G C A C G T A G C T G A T C A G C T G T A C C T G A A G T C A C G T A C G T
A C G T A C G T G C T A G A C T G A C T T G C A C G T A A G T C C G T A T A G C G A T C G A C T

PB0022.1_Gata5_1/Jaspar

Match Rank:6
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---RCCTYHTCAC----
NTNTTCTTATCAGTNTN
 A C G T A C G T A C G T C T G A A T G C A T G C A C G T A G C T G A T C A G C T G T A C C T G A A G T C A C G T A C G T A C G T A C G T
G C T A G C A T G T A C A G C T A G C T A T G C C G A T C G A T C G T A A C G T A G T C C G T A T C A G G A C T G C A T G C A T C G T A

Nr2f6(var.2)/MA0728.1/Jaspar

Match Rank:7
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--RCCTYHTCAC---
TGACCTTTTGACCTC
 A C G T A C G T C T G A A T G C A T G C A C G T A G C T G A T C A G C T G T A C C T G A A G T C A C G T A C G T A C G T
A G C T C T A G C G T A G T A C A G T C A C G T G A C T G C A T C A G T T C A G G T C A A G T C A G T C G A C T A G T C

Gata4/MA0482.1/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:forward strand
Alignment:RCCTYHTCAC--
-TCTTATCTCCC
 C T G A A T G C A T G C A C G T A G C T G A T C A G C T G T A C C T G A A G T C A C G T A C G T
A C G T A G C T A T G C A G C T A C G T G T C A A C G T A G T C C G A T A T G C G A T C A G T C

Rarb/MA0857.1/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--RCCTYHTCAC----
TGACCTTTTGACCTTT
 A C G T A C G T C T G A A T G C A T G C A C G T A G C T G A T C A G C T G T A C C T G A A G T C A C G T A C G T A C G T A C G T
G A C T T C A G T C G A T G A C A G T C A G C T G A C T C G A T A G C T T A C G G T C A T G A C G T A C A G C T G A C T C G A T

Rarg/MA0859.1/Jaspar

Match Rank:10
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---RCCTYHTCAC---
TTGACCTTTTGACCTT
 A C G T A C G T A C G T C T G A A T G C A T G C A C G T A G C T G A T C A G C T G T A C C T G A A G T C A C G T A C G T A C G T
C G A T A G C T T C A G T G C A T G A C G T A C A G C T G A C T G C A T A G C T T C A G T G C A T G A C A G T C A G C T A G C T