Information for 15-AYGMGTGACTGACMGT (Motif 22)

G T C A A G T C A T C G G T C A A C T G C G A T A C T G G T C A A G T C C G A T A C T G C G T A G T A C G T C A A T C G A G C T
Reverse Opposite:
C T G A A T G C C A G T A C T G A C G T A G T C C G T A A C T G A C G T A G T C G C T A A G T C A C G T A T G C T C A G A C G T
p-value:1e-8
log p-value:-2.007e+01
Information Content per bp:1.878
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.5 +/- 14.5bp
Average Position of motif in Background28.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:1
Score:0.71
Offset:4
Orientation:reverse strand
Alignment:AYGMGTGACTGACMGT
----BTGABTGACAGS
 G T C A A G T C A T C G G T C A A C T G C G A T A C T G G T C A A G T C C G A T A C T G C G T A G T A C G T C A A T C G A G C T
A C G T A C G T A C G T A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.71
Offset:4
Orientation:reverse strand
Alignment:AYGMGTGACTGACMGT
----NTGATTGACAGN
 G T C A A G T C A T C G G T C A A C T G C G A T A C T G G T C A A G T C C G A T A C T G C G T A G T A C G T C A A T C G A G C T
A C G T A C G T A C G T A C G T A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:3
Score:0.68
Offset:5
Orientation:reverse strand
Alignment:AYGMGTGACTGACMGT-
-----TGAGTGACAGSC
 G T C A A G T C A T C G G T C A A C T G C G A T A C T G G T C A A G T C C G A T A C T G C G T A G T A C G T C A A T C G A G C T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C

Pax2/MA0067.1/Jaspar

Match Rank:4
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:AYGMGTGACTGACMGT
--NCGTGACN------
 G T C A A G T C A T C G G T C A A C T G C G A T A C T G G T C A A G T C C G A T A C T G C G T A G T A C G T C A A T C G A G C T
A C G T A C G T T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T A C G T A C G T A C G T A C G T A C G T A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:5
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AYGMGTGACTGACMGT
GTCATGCHTGRCTGS----
 A C G T A C G T A C G T G T C A A G T C A T C G G T C A A C T G C G A T A C T G G T C A A G T C C G A T A C T G C G T A G T A C G T C A A T C G A G C T
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C A C G T A C G T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.60
Offset:2
Orientation:forward strand
Alignment:AYGMGTGACTGACMGT
--AGGTGHCAGACA--
 G T C A A G T C A T C G G T C A A C T G C G A T A C T G G T C A A G T C C G A T A C T G C G T A G T A C G T C A A T C G A G C T
A C G T A C G T C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:7
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:AYGMGTGACTGACMGT
--AGGTGNCAGACAG-
 G T C A A G T C A T C G G T C A A C T G C G A T A C T G G T C A A G T C C G A T A C T G C G T A G T A C G T C A A T C G A G C T
A C G T A C G T C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G A C G T

FOS::JUN/MA0099.2/Jaspar

Match Rank:8
Score:0.58
Offset:5
Orientation:forward strand
Alignment:AYGMGTGACTGACMGT
-----TGACTCA----
 G T C A A G T C A T C G G T C A A C T G C G A T A C T G G T C A A G T C C G A T A C T G C G T A G T A C G T C A A T C G A G C T
A C G T A C G T A C G T A C G T A C G T A G C T A C T G G T C A T G A C C G A T A T G C C G T A A C G T A C G T A C G T A C G T

FOSL2/MA0478.1/Jaspar

Match Rank:9
Score:0.57
Offset:2
Orientation:forward strand
Alignment:AYGMGTGACTGACMGT
--GGATGACTCAT---
 G T C A A G T C A T C G G T C A A C T G C G A T A C T G G T C A A G T C C G A T A C T G C G T A G T A C G T C A A T C G A G C T
A C G T A C G T A C T G T C A G C T G A A C G T A C T G T C G A A T G C A C G T G T A C C G T A A C G T A C G T A C G T A C G T

JUNB/MA0490.1/Jaspar

Match Rank:10
Score:0.56
Offset:2
Orientation:forward strand
Alignment:AYGMGTGACTGACMGT
--GGATGACTCAT---
 G T C A A G T C A T C G G T C A A C T G C G A T A C T G G T C A A G T C C G A T A C T G C G T A G T A C G T C A A T C G A G C T
A C G T A C G T C A T G C T A G T C G A A C G T A C T G C G T A A T G C A C G T G T A C C G T A A C G T A C G T A C G T A C G T