Information for 10-CCTTCTTCACAAT (Motif 18)

A G T C G T A C A C G T A C G T A G T C A C G T A G C T A G T C C G T A A G T C C G T A C G T A A C G T
Reverse Opposite:
G T C A A C G T A C G T A C T G A C G T A C T G C T G A C G T A A C T G C G T A G T C A A C T G A C T G
p-value:1e-8
log p-value:-2.007e+01
Information Content per bp:1.934
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets59.8 +/- 18.0bp
Average Position of motif in Background58.5 +/- 26.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox17/MA0078.1/Jaspar

Match Rank:1
Score:0.62
Offset:7
Orientation:reverse strand
Alignment:CCTTCTTCACAAT---
-------GACAATGNN
 A G T C G T A C A C G T A C G T A G T C A C G T A G C T A G T C C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G

PB0165.1_Sox11_2/Jaspar

Match Rank:2
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CCTTCTTCACAAT---
--NNCNNAACAATTNT
 A G T C G T A C A C G T A C G T A G T C A C G T A G C T A G T C C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T G C A T G A C T A G T C G T C A C G A T C T G A C G T A A G T C C G T A T C G A A G C T G A C T G A C T G C A T

PB0175.1_Sox4_2/Jaspar

Match Rank:3
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CCTTCTTCACAAT------
--TNCNNAACAATTTTTNC
 A G T C G T A C A C G T A C G T A G T C A C G T A G C T A G T C C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A C T G A C T G A T C A T G C G A C T C T G A C G T A A G T C C G T A C T G A G A C T G A C T G A C T G A C T C G A T A G T C A T G C

SRY/MA0084.1/Jaspar

Match Rank:4
Score:0.59
Offset:4
Orientation:forward strand
Alignment:CCTTCTTCACAAT
----GTAAACAAT
 A G T C G T A C A C G T A C G T A G T C A C G T A G C T A G T C C G T A A G T C C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T

PB0132.1_Hbp1_2/Jaspar

Match Rank:5
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CCTTCTTCACAAT-------
---NNTNNACAATGGGANNN
 A G T C G T A C A C G T A C G T A G T C A C G T A G C T A G T C C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A

PB0183.1_Sry_2/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CCTTCTTCACAAT-----
-TCACGGAACAATAGGTG
 A G T C G T A C A C G T A C G T A G T C A C G T A G C T A G T C C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G A C T G A T C C G T A G T A C C A T G T C A G T G C A C G T A A G T C C T G A C G T A G C A T C T G A C T A G T C A G G A C T T A C G

PB0168.1_Sox14_2/Jaspar

Match Rank:7
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CCTTCTTCACAAT-----
---CTCACACAATGGCGC
 A G T C G T A C A C G T A C G T A G T C A C G T A G C T A G T C C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CCTTCTTCACAAT
ANTTCTNNAGAA-
 A G T C G T A C A C G T A C G T A G T C A C G T A G C T A G T C C G T A A G T C C G T A C G T A A C G T
C T G A A G C T A C G T A C G T A G T C G A C T G A C T C T G A C T G A C T A G C G T A C G T A A C G T

PB0124.1_Gabpa_2/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CCTTCTTCACAAT---
CCGTCTTCCCCCTCAC
 A G T C G T A C A C G T A C G T A G T C A C G T A G C T A G T C C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T
T G A C A G T C C A T G A C G T G A T C G C A T G A C T G A T C A G T C A T G C G T A C G A T C A G C T T A G C T G C A G A T C

PB0200.1_Zfp187_2/Jaspar

Match Rank:10
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CCTTCTTCACAAT
GAGCCCTTGTCCCTAA-
 A C G T A C G T A C G T A C G T A G T C G T A C A C G T A C G T A G T C A C G T A G C T A G T C C G T A A G T C C G T A C G T A A C G T
A C T G C T G A C T A G G T A C A G T C A G T C G A C T A G C T T C A G G A C T G A T C A G T C G T A C G A C T G C A T T C A G A C G T