Information for 8-CAAATKCTYARRR (Motif 6)

A G T C C G T A C G T A G T C A A C G T A C G T A G T C A C G T G A C T C G T A C T A G C T G A C T G A
Reverse Opposite:
A G C T A G C T A G T C A C G T C T G A G T C A A C T G G T C A C G T A A C G T A C G T A C G T A C T G
p-value:1e-10
log p-value:-2.459e+01
Information Content per bp:1.834
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets57.8 +/- 27.0bp
Average Position of motif in Background73.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0112.1_Nkx2-3/Jaspar

Match Rank:1
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CAAATKCTYARRR
CNTTAAGTACTTAANG
 A C G T A C G T A C G T A G T C C G T A C G T A G T C A A C G T A C G T A G T C A C G T G A C T C G T A C T A G C T G A C T G A
G A T C C G T A G A C T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T C G T A T C G A T C G A C T A G

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:2
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CAAATKCTYARRR-
--NTTTCTNAGAAA
 A G T C C G T A C G T A G T C A A C G T A C G T A G T C A C G T G A C T C G T A C T A G C T G A C T G A A C G T
A C G T A C G T C T G A A C G T A C G T A C G T A G T C G A C T C G A T C T G A A C T G C G T A C G T A T C G A

PB0165.1_Sox11_2/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CAAATKCTYARRR-
AAAATTGTTATGAA
 A G T C C G T A C G T A G T C A A C G T A C G T A G T C A C G T G A C T C G T A C T A G C T G A C T G A A C G T
C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A

PH0117.1_Nkx3-1/Jaspar

Match Rank:4
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CAAATKCTYARRR-
TACTAAGTACTTAAATG
 A C G T A C G T A C G T A G T C C G T A C G T A G T C A A C G T A C G T A G T C A C G T G A C T C G T A C T A G C T G A C T G A A C G T
C G A T C G A T G A T C C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T G A C G T A C G A T A T C G

PB0175.1_Sox4_2/Jaspar

Match Rank:5
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CAAATKCTYARRR-
GGAAAAATTGTTAGGAA
 A C G T A C G T A C G T A G T C C G T A C G T A G T C A A C G T A C G T A G T C A C G T G A C T C G T A C T A G C T G A C T G A A C G T
T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A

TEAD4/MA0809.1/Jaspar

Match Rank:6
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CAAATKCTYARRR
CACATTCCAT---
 A G T C C G T A C G T A G T C A A C G T A C G T A G T C A C G T G A C T C G T A C T A G C T G A C T G A
G T A C C T G A T G A C C G T A C G A T C G A T A G T C G A T C C G T A G A C T A C G T A C G T A C G T

PB0136.1_IRC900814_2/Jaspar

Match Rank:7
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CAAATKCTYARRR
ATGGAAAGTCGTAAAA
 A C G T A C G T A C G T A G T C C G T A C G T A G T C A A C G T A C G T A G T C A C G T G A C T C G T A C T A G C T G A C T G A
C T G A A G C T A C T G C T A G C T G A T C G A G T C A A C T G G A C T A G T C C A T G A C G T C T G A C G T A T C G A G C T A

BHLHE23/MA0817.1/Jaspar

Match Rank:8
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CAAATKCTYARRR
NAACATATGTTT----
 A C G T A C G T A C G T A G T C C G T A C G T A G T C A A C G T A C G T A G T C A C G T G A C T C G T A C T A G C T G A C T G A
G C T A C T G A T G C A T G A C C T G A A C G T T C G A G A C T A C T G A C G T A G C T G C A T A C G T A C G T A C G T A C G T

Stat6/MA0520.1/Jaspar

Match Rank:9
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CAAATKCTYARRR----
--ANTTCTCAGGAANNN
 A G T C C G T A C G T A G T C A A C G T A C G T A G T C A C G T G A C T C G T A C T A G C T G A C T G A A C G T A C G T A C G T A C G T
A C G T A C G T C T G A A C G T A G C T A C G T G T A C G A C T A T G C G C T A C T A G C A T G C G T A C G T A T C G A G C A T T A C G

HOXA5/MA0158.1/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CAAATKCTYARRR
CACTAATT-------
 A C G T A C G T A G T C C G T A C G T A G T C A A C G T A C G T A G T C A C G T G A C T C G T A C T A G C T G A C T G A
G T A C C T G A A T G C C G A T C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T