Information for 3-AAAGTTCCCMMAG (Motif 2)

C G T A G T C A C G T A A C T G A G C T A C G T A G T C A G T C G T A C G T A C T G C A C T G A A C T G
Reverse Opposite:
A G T C A G C T A C G T A C T G A C T G A C T G A C T G G T C A C T G A A G T C A C G T A C G T A C G T
p-value:1e-13
log p-value:-3.132e+01
Information Content per bp:1.900
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.7 +/- 24.1bp
Average Position of motif in Background48.6 +/- 19.9bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0204.1_Zfp740_2/Jaspar

Match Rank:1
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AAAGTTCCCMMAG-----
-AAATTCCCCCCGGAAGT
 C G T A G T C A C G T A A C T G A G C T A C G T A G T C A G T C G T A C G T A C T G C A C T G A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T C T G A C T G A C T G A C A G T G C A T G A T C G A T C A G T C A G T C A T G C A T G C T A C G A T C G C T G A C T G A T C A G A G C T

MZF1/MA0056.1/Jaspar

Match Rank:2
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:AAAGTTCCCMMAG
-----TCCCCA--
 C G T A G T C A C G T A A C T G A G C T A C G T A G T C A G T C G T A C G T A C T G C A C T G A A C T G
A C G T A C G T A C G T A C G T A C G T A G C T A G T C G T A C A G T C G T A C T C G A A C G T A C G T

PB0053.1_Rara_1/Jaspar

Match Rank:3
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----AAAGTTCCCMMAG
TCTCAAAGGTCACCTG-
 A C G T A C G T A C G T A C G T C G T A G T C A C G T A A C T G A G C T A C G T A G T C A G T C G T A C G T A C T G C A C T G A A C T G
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:4
Score:0.58
Offset:2
Orientation:forward strand
Alignment:AAAGTTCCCMMAG
--HTTTCCCASG-
 C G T A G T C A C G T A A C T G A G C T A C G T A G T C A G T C G T A C G T A C T G C A C T G A A C T G
A C G T A C G T G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G A C G T

PB0058.1_Sfpi1_1/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AAAGTTCCCMMAG-
NNACTTCCTCTTNN
 C G T A G T C A C G T A A C T G A G C T A C G T A G T C A G T C G T A C G T A C T G C A C T G A A C T G A C G T
C A G T G C T A C T G A A T G C C G A T C G A T A G T C A G T C A C G T A G T C G C A T G C A T G C T A T C G A

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AAAGTTCCCMMAG
GGAAATTCCC----
 A C G T C G T A G T C A C G T A A C T G A G C T A C G T A G T C A G T C G T A C G T A C T G C A C T G A A C T G
A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C A C G T A C G T A C G T A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:7
Score:0.55
Offset:-7
Orientation:forward strand
Alignment:-------AAAGTTCCCMMAG
AGAGTCCAAAGTCCA-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A G T C A C G T A A C T G A G C T A C G T A G T C A G T C G T A C G T A C T G C A C T G A A C T G
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A A C G T A C G T A C G T A C G T A C G T

GFY(?)/Promoter/Homer

Match Rank:8
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---AAAGTTCCCMMAG
ACTACAATTCCC----
 A C G T A C G T A C G T C G T A G T C A C G T A A C T G A G C T A C G T A G T C A G T C G T A C G T A C T G C A C T G A A C T G
T G C A T A G C G A C T T G C A T G A C T G C A C G T A A G C T A G C T A G T C A G T C G T A C A C G T A C G T A C G T A C G T

HSF1/MA0486.2/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-AAAGTTCCCMMAG
GAACGTTCTAGAA-
 A C G T C G T A G T C A C G T A A C T G A G C T A C G T A G T C A G T C G T A C G T A C T G C A C T G A A C T G
C T A G G C T A C G T A A G T C T C A G C G A T C A G T A G T C A C G T T C G A A C T G G T C A G C T A A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:10
Score:0.54
Offset:-8
Orientation:forward strand
Alignment:--------AAAGTTCCCMMAG
CANAGNNCAAAGTCCA-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A G T C A C G T A A C T G A G C T A C G T A G T C A G T C G T A C G T A C T G C A C T G A A C T G
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A A C G T A C G T A C G T A C G T A C G T