Information for 5-GRGGCCTTTA (Motif 8)

C T A G C T G A A T C G A C T G A G T C A G T C A C G T A C G T A G C T C G T A
Reverse Opposite:
A C G T C T G A G T C A C G T A A C T G C T A G A G T C A T G C A G C T A G T C
p-value:1e-9
log p-value:-2.235e+01
Information Content per bp:1.836
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.19%
Number of Background Sequences with motif35.6
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets46.5 +/- 26.9bp
Average Position of motif in Background39.8 +/- 24.8bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GRGGCCTTTA
CNAGGCCT---
 A C G T C T A G C T G A A T C G A C T G A G T C A G T C A C G T A C G T A G C T C G T A
A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:2
Score:0.68
Offset:1
Orientation:forward strand
Alignment:GRGGCCTTTA---
-AGGTCTCTAACC
 C T A G C T G A A T C G A C T G A G T C A G T C A C G T A C G T A G C T C G T A A C G T A C G T A C G T
A C G T C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:3
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GRGGCCTTTA
CTAGGCCT---
 A C G T C T A G C T G A A T C G A C T G A G T C A G T C A C G T A C G T A G C T C G T A
T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:4
Score:0.63
Offset:-6
Orientation:forward strand
Alignment:------GRGGCCTTTA
GGGGCCGAGGCCTG--
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G C T G A A T C G A C T G A G T C A G T C A C G T A C G T A G C T C G T A
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T A C G T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:5
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GRGGCCTTTA
NRRGGGTCTT--
 A C G T A C G T C T A G C T G A A T C G A C T G A G T C A G T C A C G T A C G T A G C T C G T A
A C T G T C G A C T A G A C T G A C T G A C T G A C G T A G T C A C G T A G C T A C G T A C G T

Barhl1/MA0877.1/Jaspar

Match Rank:6
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GRGGCCTTTA--
--NNCAATTANN
 C T A G C T G A A T C G A C T G A G T C A G T C A C G T A C G T A G C T C G T A A C G T A C G T
A C G T A C G T T C G A T A C G G A T C T C G A G C T A G A C T G C A T C G T A C T A G T A G C

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GRGGCCTTTA--
--GGCCATTAAC
 C T A G C T G A A T C G A C T G A G T C A G T C A C G T A C G T A G C T C G T A A C G T A C G T
A C G T A C G T C T A G T A C G G A T C G T A C G C T A A G C T A G C T G T C A T C G A T A G C

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GRGGCCTTTA-
-TGACCTTGAN
 C T A G C T G A A T C G A C T G A G T C A G T C A C G T A C G T A G C T C G T A A C G T
A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A

PH0073.1_Hoxc9/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GRGGCCTTTA-----
GGAGGTCATTAATTAT
 A C G T C T A G C T G A A T C G A C T G A G T C A G T C A C G T A C G T A G C T C G T A A C G T A C G T A C G T A C G T A C G T
T C A G C A T G T C G A C T A G T C A G G A C T G T A C C T G A G C A T G C A T C G T A G C T A G A C T G A C T C G T A A C G T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:10
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GRGGCCTTTA-----
---DGWTTTATGRCN
 C T A G C T G A A T C G A C T G A G T C A G T C A C G T A C G T A G C T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C