Information for 2-CTGAGAARAGKGAACT (Motif 4)

A T G C A C G T A T C G C T G A A C T G G C T A C G T A C T G A C G T A A C T G A C T G A C T G C G T A G C T A A T G C C A G T
Reverse Opposite:
G T C A A T C G C G A T A C G T T A G C G T A C A G T C A C G T A G C T C G A T C A G T T A G C G A C T T A G C C G T A A T C G
p-value:1e-12
log p-value:-2.986e+01
Information Content per bp:1.721
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.08%
Number of Background Sequences with motif12.6
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets53.5 +/- 26.5bp
Average Position of motif in Background61.3 +/- 31.5bp
Strand Bias (log2 ratio + to - strand density)-1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e1/MA0676.1/Jaspar

Match Rank:1
Score:0.60
Offset:5
Orientation:forward strand
Alignment:CTGAGAARAGKGAACT
-----AAAAGTCAA--
 A T G C A C G T A T C G C T G A A C T G G C T A C G T A C T G A C G T A A C T G A C T G A C T G C G T A G C T A A T G C C A G T
A C G T A C G T A C G T A C G T A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T A C G T

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:2
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CTGAGAARAGKGAACT--
---GGAAANTGAAACTNA
 A T G C A C G T A T C G C T G A A C T G G C T A C G T A C T G A C G T A A C T G A C T G A C T G C G T A G C T A A T G C C A G T A C G T A C G T
A C G T A C G T A C G T T C A G C T A G C T G A C G T A T C G A T G C A G A C T C T A G T C G A C G T A C T G A A T G C G A C T C T A G G T C A

SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer

Match Rank:3
Score:0.53
Offset:5
Orientation:forward strand
Alignment:CTGAGAARAGKGAACT-
-----AAAGRGGAAGTG
 A T G C A C G T A T C G C T G A A C T G G C T A C G T A C T G A C G T A A C T G A C T G A C T G C G T A G C T A A T G C C A G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A C T G A C G T A C T A G T C G A C T A G A C T G C G T A C G T A T A C G A G C T A T C G

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.52
Offset:7
Orientation:forward strand
Alignment:CTGAGAARAGKGAACT--
-------AAGGCAAGTGT
 A T G C A C G T A T C G C T G A A C T G G C T A C G T A C T G A C G T A A C T G A C T G A C T G C G T A G C T A A T G C C A G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:5
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:CTGAGAARAGKGAACT
----GAAAMTGAAACT
 A T G C A C G T A T C G C T G A A C T G G C T A C G T A C T G A C G T A A C T G A C T G A C T G C G T A G C T A A T G C C A G T
A C G T A C G T A C G T A C G T C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.51
Offset:6
Orientation:forward strand
Alignment:CTGAGAARAGKGAACT
------AAAGTAAACA
 A T G C A C G T A T C G C T G A A C T G G C T A C G T A C T G A C G T A A C T G A C T G A C T G C G T A G C T A A T G C C A G T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:7
Score:0.51
Offset:6
Orientation:forward strand
Alignment:CTGAGAARAGKGAACT
------AAAGTAAACA
 A T G C A C G T A T C G C T G A A C T G G C T A C G T A C T G A C G T A A C T G A C T G A C T G C G T A G C T A A T G C C A G T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-CTGAGAARAGKGAACT
CSTGGGAAAD-------
 A C G T A T G C A C G T A T C G C T G A A C T G G C T A C G T A C T G A C G T A A C T G A C T G A C T G C G T A G C T A A T G C C A G T
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0081.1_Tcf1_1/Jaspar

Match Rank:9
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:CTGAGAARAGKGAACT----
---NNNTTAGTTAACTNANN
 A T G C A C G T A T C G C T G A A C T G G C T A C G T A C T G A C G T A A C T G A C T G A C T G C G T A G C T A A T G C C A G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T C A G T G A C T A G C T G A C T C T G A T A C G G A C T C G A T C G T A C G T A A G T C A G C T C T G A T C G A C T A G A C G T

PB0033.1_Irf3_1/Jaspar

Match Rank:10
Score:0.50
Offset:3
Orientation:forward strand
Alignment:CTGAGAARAGKGAACT-
---GAGAACCGAAACTG
 A T G C A C G T A T C G C T G A A C T G G C T A C G T A C T G A C G T A A C T G A C T G A C T G C G T A G C T A A T G C C A G T A C G T
A C G T A C G T A C G T A C T G C T G A C T A G C G T A G C T A G T A C T A G C C T A G T C G A G C T A G C T A A T G C G A C T C T A G