Information for 3-AACAGCGCCC (Motif 3)

T G C A C T G A A G T C G C T A A T C G A T G C C T A G A G T C A G T C T G A C
Reverse Opposite:
A C T G A C T G C T A G G A T C A T C G A T G C C G A T A C T G A G C T A C G T
p-value:1e-14
log p-value:-3.413e+01
Information Content per bp:1.827
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif3.24%
Number of Background Sequences with motif231.2
Percentage of Background Sequences with motif0.49%
Average Position of motif in Targets58.8 +/- 24.1bp
Average Position of motif in Background53.0 +/- 32.4bp
Strand Bias (log2 ratio + to - strand density)-1.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0158.1_Rhox11_2/Jaspar

Match Rank:1
Score:0.70
Offset:-6
Orientation:reverse strand
Alignment:------AACAGCGCCC-
TCNCTTTACAGCGNNNT
 A C G T A C G T A C G T A C G T A C G T A C G T T G C A C T G A A G T C G C T A A T C G A T G C C T A G A G T C A G T C T G A C A C G T
C G A T A G T C A T G C G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G G A T C C T A G C A G T G T A C A G T C C G A T

Rhox11/MA0629.1/Jaspar

Match Rank:2
Score:0.70
Offset:-6
Orientation:reverse strand
Alignment:------AACAGCGCCC-
TCNNTTTACAGCGNNNT
 A C G T A C G T A C G T A C G T A C G T A C G T T G C A C T G A A G T C G C T A A T C G A T G C C T A G A G T C A G T C T G A C A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

PH0157.1_Rhox11_1/Jaspar

Match Rank:3
Score:0.70
Offset:-6
Orientation:reverse strand
Alignment:------AACAGCGCCC-
TCNNTTTACAGCGNNNT
 A C G T A C G T A C G T A C G T A C G T A C G T T G C A C T G A A G T C G C T A A T C G A T G C C T A G A G T C A G T C T G A C A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

PB0039.1_Klf7_1/Jaspar

Match Rank:4
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--AACAGCGCCC----
TCGACCCCGCCCCTAT
 A C G T A C G T T G C A C T G A A G T C G C T A A T C G A T G C C T A G A G T C A G T C T G A C A C G T A C G T A C G T A C G T
G A C T A G T C C T A G T C G A G T A C G T A C T G A C G A T C C T A G A G T C A G T C A G T C G A T C G A C T G C T A C G A T

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:AACAGCGCCC
CACAGN----
 T G C A C T G A A G T C G C T A A T C G A T G C C T A G A G T C A G T C T G A C
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T

POL006.1_BREu/Jaspar

Match Rank:6
Score:0.64
Offset:1
Orientation:forward strand
Alignment:AACAGCGCCC
-AGCGCGCC-
 T G C A C T G A A G T C G C T A A T C G A T G C C T A G A G T C A G T C T G A C
A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:7
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AACAGCGCCC----
NRGCCCCRCCCHBNN
 A C G T T G C A C T G A A G T C G C T A A T C G A T G C C T A G A G T C A G T C T G A C A C G T A C G T A C G T A C G T
G A C T T C A G C T A G A G T C A G T C G T A C A G T C C T G A A G T C A G T C A G T C G A C T A G T C A C T G A T G C

PB0008.1_E2F2_1/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AACAGCGCCC---
ATAAAGGCGCGCGAT
 A C G T A C G T T G C A C T G A A G T C G C T A A T C G A T G C C T A G A G T C A G T C T G A C A C G T A C G T A C G T
C T G A G C A T C G T A G C T A C T G A T A C G A T C G T G A C A T C G A T G C A T C G G A T C T A C G G C T A G C A T

POL003.1_GC-box/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AACAGCGCCC---
NAGCCCCGCCCCCN
 A C G T T G C A C T G A A G T C G C T A A T C G A T G C C T A G A G T C A G T C T G A C A C G T A C G T A C G T
G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--AACAGCGCCC
NHAACBGYYV--
 A C G T A C G T T G C A C T G A A G T C G C T A A T C G A T G C C T A G A G T C A G T C T G A C
A G T C G C A T C G T A C G T A G T A C A C G T A C T G G A T C G A T C T C G A A C G T A C G T