Information for 4-CCCCCGTGTGGCC (Motif 5)

G A T C T G A C G T A C A G T C A G T C C T A G A G C T A T C G A G C T A C T G A C T G A G T C G A T C
Reverse Opposite:
C A T G A C T G A G T C A G T C C T G A A T G C C T G A A G T C A C T G C T A G A C T G A C T G C A T G
p-value:1e-13
log p-value:-3.204e+01
Information Content per bp:1.795
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.19%
Number of Background Sequences with motif14.6
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets44.8 +/- 18.3bp
Average Position of motif in Background36.0 +/- 26.0bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF/MA0139.1/Jaspar

Match Rank:1
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----CCCCCGTGTGGCC-
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T G A T C T G A C G T A C A G T C A G T C C T A G A G C T A T C G A G C T A C T G A C T G A G T C G A T C A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.63
Offset:-8
Orientation:forward strand
Alignment:--------CCCCCGTGTGGCC
CNNBRGCGCCCCCTGSTGGC-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C T G A C G T A C A G T C A G T C C T A G A G C T A T C G A G C T A C T G A C T G A G T C G A T C
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.63
Offset:-6
Orientation:forward strand
Alignment:------CCCCCGTGTGGCC-
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T A C G T G A T C T G A C G T A C A G T C A G T C C T A G A G C T A T C G A G C T A C T G A C T G A G T C G A T C A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

PLAG1/MA0163.1/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CCCCCGTGTGGCC--
-CCCCCTTGGGCCCC
 G A T C T G A C G T A C A G T C A G T C C T A G A G C T A T C G A G C T A C T G A C T G A G T C G A T C A C G T A C G T
A C G T A G T C G T A C A G T C A G T C G A T C A C G T C G A T C A T G T C A G A T C G G T A C A G T C G A T C A G T C

PB0103.1_Zic3_1/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CCCCCGTGTGGCC
CCCCCCCGGGGGGGT
 A C G T A C G T G A T C T G A C G T A C A G T C A G T C C T A G A G C T A T C G A G C T A C T G A C T G A G T C G A T C
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G T A C G A C T G C A T G C A T G C A T G A T C G A G C T

PB0102.1_Zic2_1/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CCCCCGTGTGGCC
CCCCCCCGGGGGGGT
 A C G T A C G T G A T C T G A C G T A C A G T C A G T C C T A G A G C T A T C G A G C T A C T G A C T G A G T C G A T C
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G A T C G A C T G C A T G C A T G C A T G A T C G A C G T

PB0101.1_Zic1_1/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CCCCCGTGTGGCC
CACCCCCGGGGGGG-
 A C G T A C G T G A T C T G A C G T A C A G T C A G T C C T A G A G C T A T C G A G C T A C T G A C T G A G T C G A T C
A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G A C G T

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:8
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CCCCCGTGTGGCC
--RTCATGTGAC-
 G A T C T G A C G T A C A G T C A G T C C T A G A G C T A T C G A G C T A C T G A C T G A G T C G A T C
A C G T A C G T T C A G A G C T A T G C C G T A A G C T T C A G C A G T A C T G C T G A A G T C A C G T

Myc/MA0147.2/Jaspar

Match Rank:9
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CCCCCGTGTGGCC
---CCATGTGCTT
 G A T C T G A C G T A C A G T C A G T C C T A G A G C T A T C G A G C T A C T G A C T G A G T C G A T C
A C G T A C G T A C G T T G A C A G T C C G T A A G C T A C T G A C G T A C T G A T G C G A C T A G C T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CCCCCGTGTGGCC
-VBSYGTCTGG--
 G A T C T G A C G T A C A G T C A G T C C T A G A G C T A T C G A G C T A C T G A C T G A G T C G A T C
A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T