Information for 5-TGGTGCCACC (Motif 3)

C A G T A C T G A C T G A G C T A C T G A T G C G T A C G T C A G A T C A T G C
Reverse Opposite:
T A C G C T A G A C G T A C T G A T C G G T A C T C G A T G A C G T A C G T C A
p-value:1e-14
log p-value:-3.390e+01
Information Content per bp:1.824
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif2.60%
Number of Background Sequences with motif137.7
Percentage of Background Sequences with motif0.29%
Average Position of motif in Targets52.8 +/- 18.1bp
Average Position of motif in Background48.5 +/- 29.5bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hic1/MA0739.1/Jaspar

Match Rank:1
Score:0.73
Offset:2
Orientation:forward strand
Alignment:TGGTGCCACC-
--ATGCCAACC
 C A G T A C T G A C T G A G C T A C T G A T G C G T A C G T C A G A T C A T G C A C G T
A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C

PB0029.1_Hic1_1/Jaspar

Match Rank:2
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-TGGTGCCACC-----
ACTATGCCAACCTACC
 A C G T C A G T A C T G A C T G A G C T A C T G A T G C G T A C G T C A G A T C A T G C A C G T A C G T A C G T A C G T A C G T
C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C

PB0113.1_E2F3_2/Jaspar

Match Rank:3
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----TGGTGCCACC---
AGCTCGGCGCCAAAAGC
 A C G T A C G T A C G T A C G T C A G T A C T G A C T G A G C T A C T G A T G C G T A C G T C A G A T C A T G C A C G T A C G T A C G T
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C

PB0112.1_E2F2_2/Jaspar

Match Rank:4
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----TGGTGCCACC---
CCTTCGGCGCCAAAAGG
 A C G T A C G T A C G T A C G T C A G T A C T G A C T G A G C T A C T G A T G C G T A C G T C A G A T C A T G C A C G T A C G T A C G T
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TGGTGCCACC
-CGTGCCAAG
 C A G T A C T G A C T G A G C T A C T G A T G C G T A C G T C A G A T C A T G C
A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

E2F1/MA0024.3/Jaspar

Match Rank:6
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TGGTGCCACC
TTTGGCGCCAAA
 A C G T A C G T C A G T A C T G A C T G A G C T A C T G A T G C G T A C G T C A G A T C A T G C
G C A T C G A T C A G T T C A G A T C G A T G C C T A G A T G C A T G C G C T A G C T A C G T A

NFIA/MA0670.1/Jaspar

Match Rank:7
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TGGTGCCACC-
-GGTGCCAAGT
 C A G T A C T G A C T G A G C T A C T G A T G C G T A C G T C A G A T C A T G C A C G T
A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:8
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TGGTGCCACC
AGGTGTCA--
 C A G T A C T G A C T G A G C T A C T G A T G C G T A C G T C A G A T C A T G C
C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:9
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:TGGTGCCACC
---TGCCAA-
 C A G T A C T G A C T G A G C T A C T G A T G C G T A C G T C A G A T C A T G C
A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T

HIC2/MA0738.1/Jaspar

Match Rank:10
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TGGTGCCACC-
--ATGCCCACC
 C A G T A C T G A C T G A G C T A C T G A T G C G T A C G T C A G A T C A T G C A C G T
A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C