Information for 12-CATGTTTCTC (Motif 15)

A G T C G C T A A C G T A C T G A G C T C G A T A G C T A G T C A C G T A G T C
Reverse Opposite:
A C T G C G T A A C T G T C G A C G T A C T G A T G A C G T C A C G A T A C T G
p-value:1e-7
log p-value:-1.771e+01
Information Content per bp:1.854
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.19%
Number of Background Sequences with motif55.4
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets52.7 +/- 28.5bp
Average Position of motif in Background52.0 +/- 29.7bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:1
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----CATGTTTCTC
GKVTCADRTTWC--
 A C G T A C G T A C G T A C G T A G T C G C T A A C G T A C T G A G C T C G A T A G C T A G T C A C G T A G T C
C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C A C G T A C G T

PH0086.1_Irx5/Jaspar

Match Rank:2
Score:0.61
Offset:-7
Orientation:reverse strand
Alignment:-------CATGTTTCTC
ANTNNTACATGTANNTN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G C T A A C G T A C T G A G C T C G A T A G C T A G T C A C G T A G T C
G C T A G T C A G C A T G C A T C A G T C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A C G A T G C T A G C A T G C A T

PH0082.1_Irx2/Jaspar

Match Rank:3
Score:0.60
Offset:-7
Orientation:reverse strand
Alignment:-------CATGTTTCTC
ANTNTTACATGTATNTA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G C T A A C G T A C T G A G C T C G A T A G C T A G T C A C G T A G T C
C G T A T G C A G C A T G A C T G A C T C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A G A C T G C A T C G A T G C T A

PH0084.1_Irx3_2/Jaspar

Match Rank:4
Score:0.58
Offset:-7
Orientation:reverse strand
Alignment:-------CATGTTTCTC
NNTATTACATGTANNNT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G C T A A C G T A C T G A G C T C G A T A G C T A G T C A C G T A G T C
G C A T C T G A G C A T G C T A A C G T C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A C G A T G C T A G C A T G C A T

PH0083.1_Irx3_1/Jaspar

Match Rank:5
Score:0.58
Offset:-7
Orientation:reverse strand
Alignment:-------CATGTTTCTC
ANTATTACATGTANNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G C T A A C G T A C T G A G C T C G A T A G C T A G T C A C G T A G T C
G C T A C T A G G C A T G C T A A C G T C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A A G C T G C A T G A C T G C A T

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:6
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CATGTTTCTC
GKMTCADRTTWC--
 A C G T A C G T A C G T A C G T A G T C G C T A A C G T A C T G A G C T C G A T A G C T A G T C A C G T A G T C
C T A G C A G T T G C A A C G T G A T C T C G A C T A G T C A G A C G T C A G T G C A T G A T C A C G T A C G T

SCRT1/MA0743.1/Jaspar

Match Rank:7
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----CATGTTTCTC
ANCCACCTGTTGCNC
 A C G T A C G T A C G T A C G T A C G T A G T C G C T A A C G T A C T G A G C T C G A T A G C T A G T C A C G T A G T C
C T G A T C G A T G A C G T A C T C G A G T A C G A T C A C G T A C T G A C G T C A G T C T A G T G A C C G A T A G T C

PH0085.1_Irx4/Jaspar

Match Rank:8
Score:0.57
Offset:-7
Orientation:reverse strand
Alignment:-------CATGTTTCTC
NNTTTTACATGTANNNT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G C T A A C G T A C T G A G C T C G A T A G C T A G T C A C G T A G T C
G C A T T A C G G C A T G C A T C A G T C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G A C T C G T A G C A T G C A T

FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer

Match Rank:9
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CATGTTTCTC
NVWTGTTTAC-
 A C G T A G T C G C T A A C G T A C T G A G C T C G A T A G C T A G T C A C G T A G T C
A G C T T G A C C G A T C G A T C T A G A C G T C A G T C A G T G C T A A G T C A C G T

Hes2/MA0616.1/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CATGTTTCTC--
GCACGTGTCNNNN
 A C G T A G T C G C T A A C G T A C T G A G C T C G A T A G C T A G T C A C G T A G T C A C G T A C G T
A C T G A G T C C G T A A G T C A C T G A G C T A C T G A G C T A T G C A C T G C G A T C G A T C G T A