Information for 7-CAGTGGCAATGCATTT (Motif 18)

A G T C C G T A A C T G A C G T A C T G A C T G G T A C C G T A C T G A G C A T A C T G A G T C G T C A A G C T A C G T A C G T
Reverse Opposite:
G T C A C G T A C T G A A C G T A C T G A G T C C G T A A G C T C G A T A C T G G T A C G T A C T C G A A G T C A C G T C T A G
p-value:1e-9
log p-value:-2.147e+01
Information Content per bp:1.821
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.8 +/- 24.1bp
Average Position of motif in Background65.8 +/- 20.3bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CAGTGGCAATGCATTT
CTGTTGCTAGGS----
 A G T C C G T A A C T G A C G T A C T G A C T G G T A C C G T A C T G A G C A T A C T G A G T C G T C A A G C T A C G T A C G T
A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G A C G T A C G T A C G T A C G T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:2
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CAGTGGCAATGCATTT
NCCGTTGCTANGNGN--
 A C G T A G T C C G T A A C T G A C G T A C T G A C T G G T A C C G T A C T G A G C A T A C T G A G T C G T C A A G C T A C G T A C G T
G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G A C G T A C G T

PB0051.1_Osr2_1/Jaspar

Match Rank:3
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----CAGTGGCAATGCATTT
ATGTACAGTAGCAAAG-----
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C G T A C T G A C T G G T A C C G T A C T G A G C A T A C T G A G T C G T C A A G C T A C G T A C G T
G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G A C G T A C G T A C G T A C G T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:4
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CAGTGGCAATGCATTT--
-AATCGCACTGCATTCCG
 A G T C C G T A A C T G A C G T A C T G A C T G G T A C C G T A C T G A G C A T A C T G A G T C G T C A A G C T A C G T A C G T A C G T A C G T
A C G T C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

PB0050.1_Osr1_1/Jaspar

Match Rank:5
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----CAGTGGCAATGCATTT
ATTTACAGTAGCAAAA-----
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C G T A C T G A C T G G T A C C G T A C T G A G C A T A C T G A G T C G T C A A G C T A C G T A C G T
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A A C G T A C G T A C G T A C G T A C G T

PB0055.1_Rfx4_1/Jaspar

Match Rank:6
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CAGTGGCAATGCATTT
NNCGTTGCTATGGNN--
 A C G T A G T C C G T A A C T G A C G T A C T G A C T G G T A C C G T A C T G A G C A T A C T G A G T C G T C A A G C T A C G T A C G T
G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A A C G T A C G T

PB0054.1_Rfx3_1/Jaspar

Match Rank:7
Score:0.49
Offset:-5
Orientation:reverse strand
Alignment:-----CAGTGGCAATGCATTT--
NTNNNNNGTTGCTANGGNNCANA
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C G T A C T G A C T G G T A C C G T A C T G A G C A T A C T G A G T C G T C A A G C T A C G T A C G T A C G T A C G T
C G A T C G A T C G T A C G T A G C A T A G T C A T C G C T A G A C G T G A C T C T A G A G T C A G C T C T G A C T G A T A C G A C T G C T A G C A G T T A G C T C G A G T A C C T G A

Myb/MA0100.2/Jaspar

Match Rank:8
Score:0.48
Offset:-3
Orientation:reverse strand
Alignment:---CAGTGGCAATGCATTT
TGGCAGTTGN---------
 A C G T A C G T A C G T A G T C C G T A A C T G A C G T A C T G A C T G G T A C C G T A C T G A G C A T A C T G A G T C G T C A A G C T A C G T A C G T
C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:9
Score:0.48
Offset:-7
Orientation:reverse strand
Alignment:-------CAGTGGCAATGCATTT
NNNNTGCCAGTGATTG-------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C G T A C T G A C T G G T A C C G T A C T G A G C A T A C T G A G T C G T C A A G C T A C G T A C G T
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:10
Score:0.48
Offset:-3
Orientation:forward strand
Alignment:---CAGTGGCAATGCATTT
TGGCAGTTGG---------
 A C G T A C G T A C G T A G T C C G T A A C T G A C G T A C T G A C T G G T A C C G T A C T G A G C A T A C T G A G T C G T C A A G C T A C G T A C G T
G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T