Information for 17-AAGGGCAGAAAGC (Motif 17)

C G T A C T G A A C T G A C T G A C T G A G T C C G T A A C T G C T G A C T G A C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T A G C T A G C T A G T C C G A T A C T G A G T C A G T C A G T C A G C T A C G T
p-value:1e-9
log p-value:-2.147e+01
Information Content per bp:1.913
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.4 +/- 4.9bp
Average Position of motif in Background38.0 +/- 23.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THAP1/MA0597.1/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-AAGGGCAGAAAGC
TNNGGGCAG-----
 A C G T C G T A C T G A A C T G A C T G A C T G A G T C C G T A A C T G C T G A C T G A C G T A A C T G A G T C
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AAGGGCAGAAAGC
CAAAGGTCAG-----
 A C G T A C G T C G T A C T G A A C T G A C T G A C T G A G T C C G T A A C T G C T G A C T G A C G T A A C T G A G T C
A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T A C G T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:3
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AAGGGCAGAAAGC
CAAGGHCANV----
 A C G T C G T A C T G A A C T G A C T G A C T G A G T C C G T A A C T G C T G A C T G A C G T A A C T G A G T C
T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:4
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---AAGGGCAGAAAGC
BTCAAGGTCA------
 A C G T A C G T A C G T C G T A C T G A A C T G A C T G A C T G A G T C C G T A A C T G C T G A C T G A C G T A A C T G A G T C
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

PB0202.1_Zfp410_2/Jaspar

Match Rank:5
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----AAGGGCAGAAAGC
NNTNNGGGGCGGNGNGN
 A C G T A C G T A C G T A C G T C G T A C T G A A C T G A C T G A C T G A G T C C G T A A C T G C T G A C T G A C G T A A C T G A G T C
C G T A C T G A C A G T C G A T G C A T T A C G A C T G T A C G A C T G T G A C T C A G C T A G C T A G C T A G C A G T C T A G T C G A

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:6
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---AAGGGCAGAAAGC
NTCAAGGTCA------
 A C G T A C G T A C G T C G T A C T G A A C T G A C T G A C T G A G T C C G T A A C T G C T G A C T G A C G T A A C T G A G T C
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--AAGGGCAGAAAGC
TCAAGGTCAN-----
 A C G T A C G T C G T A C T G A A C T G A C T G A C T G A G T C C G T A A C T G C T G A C T G A C G T A A C T G A G T C
A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T A C G T A C G T A C G T A C G T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:8
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:AAGGGCAGAAAGC---
--TGGCAGNCTGCCAG
 C G T A C T G A A C T G A C T G A C T G A G T C C G T A A C T G C T G A C T G A C G T A A C T G A G T C A C G T A C G T A C G T
A C G T A C G T C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:9
Score:0.55
Offset:4
Orientation:forward strand
Alignment:AAGGGCAGAAAGC-
----ACAGGAAGTG
 C G T A C T G A A C T G A C T G A C T G A G T C C G T A A C T G C T G A C T G A C G T A A C T G A G T C A C G T
A C G T A C G T A C G T A C G T T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G

Nr5a2/MA0505.1/Jaspar

Match Rank:10
Score:0.54
Offset:-6
Orientation:forward strand
Alignment:------AAGGGCAGAAAGC
AAGTTCAAGGTCAGC----
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T G A A C T G A C T G A C T G A G T C C G T A A C T G C T G A C T G A C G T A A C T G A G T C
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C A C G T A C G T A C G T A C G T