p-value: | 1e-152 |
log p-value: | -3.514e+02 |
Information Content per bp: | 1.534 |
Number of Target Sequences with motif | 204.0 |
Percentage of Target Sequences with motif | 24.85% |
Number of Background Sequences with motif | 927.0 |
Percentage of Background Sequences with motif | 2.02% |
Average Position of motif in Targets | 51.5 +/- 22.0bp |
Average Position of motif in Background | 50.4 +/- 32.0bp |
Strand Bias (log2 ratio + to - strand density) | -0.0 |
Multiplicity (# of sites on avg that occur together) | 1.03 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer
Match Rank: | 1 |
Score: | 0.92 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TTYMYGCHTGANTGVN---- TTTMCGCTTSABTGAACACN |
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Pax6/MA0069.1/Jaspar
Match Rank: | 2 |
Score: | 0.86 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | TTYMYGCHTGANTGVN TTCACGCATGAGTT-- |
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Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer
Match Rank: | 3 |
Score: | 0.79 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | TTYMYGCHTGANTGVN GTCATGCHTGRCTGS- |
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PAX1/MA0779.1/Jaspar
Match Rank: | 4 |
Score: | 0.78 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TTYMYGCHTGANTGVN CGTCACGCATGACTGCA |
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PAX9/MA0781.1/Jaspar
Match Rank: | 5 |
Score: | 0.77 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TTYMYGCHTGANTGVN CGTCACGCATGACTGCA |
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PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer
Match Rank: | 6 |
Score: | 0.77 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TTYMYGCHTGANTGVN NGTCACGCTTGGCTGC- |
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PAX5/MA0014.2/Jaspar
Match Rank: | 7 |
Score: | 0.72 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TTYMYGCHTGANTGVN--- GTCACGCTTGGCTGCNCNN |
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Dux/MA0611.1/Jaspar
Match Rank: | 8 |
Score: | 0.61 |
Offset: | 7 |
Orientation: | reverse strand |
Alignment: | TTYMYGCHTGANTGVN -------TTGATTGN- |
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Nkx2-5(var.2)/MA0503.1/Jaspar
Match Rank: | 9 |
Score: | 0.58 |
Offset: | 6 |
Orientation: | reverse strand |
Alignment: | TTYMYGCHTGANTGVN- ------CTTGAGTGGCT |
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bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer
Match Rank: | 10 |
Score: | 0.57 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---TTYMYGCHTGANTGVN NAGTTTCABTHTGACTNW- |
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