Information for 2-AGTTCTCGGCGTT (Motif 3)

G T C A C T A G A C G T A G C T A G T C A C G T A T G C A C T G A C T G A G T C A C T G A C G T A C G T
Reverse Opposite:
G T C A G T C A G T A C A C T G A G T C T A G C A T C G C G T A C T A G C T G A G T C A A G T C C A G T
p-value:1e-12
log p-value:-2.838e+01
Information Content per bp:1.806
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif6.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets38.6 +/- 18.6bp
Average Position of motif in Background71.1 +/- 23.7bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0139.1_Irf5_2/Jaspar

Match Rank:1
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--AGTTCTCGGCGTT
NNAATTCTCGNTNAN
 A C G T A C G T G T C A C T A G A C G T A G C T A G T C A C G T A T G C A C T G A C T G A G T C A C T G A C G T A C G T
A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A

Vdr/MA0693.1/Jaspar

Match Rank:2
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-AGTTCTCGGCGTT--
GAGTTCATTGAGTTCA
 A C G T G T C A C T A G A C G T A G C T A G T C A C G T A T G C A C T G A C T G A G T C A C T G A C G T A C G T A C G T A C G T
T C A G T C G A C A T G A C G T A C G T A G T C C T G A G A C T G A C T T C A G T C G A C T A G A C G T A C G T A G T C C T G A

PB0138.1_Irf4_2/Jaspar

Match Rank:3
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--AGTTCTCGGCGTT
AGTATTCTCGGTTGC
 A C G T A C G T G T C A C T A G A C G T A G C T A G T C A C G T A T G C A C T G A C T G A G T C A C T G A C G T A C G T
T C A G T A C G A G C T G C T A G A C T C A G T G A T C A G C T G A T C T C A G T C A G C G A T G A C T C A T G A T G C

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:4
Score:0.51
Offset:-5
Orientation:reverse strand
Alignment:-----AGTTCTCGGCGTT
TTCNAAGTACTTNNNNN-
 A C G T A C G T A C G T A C G T A C G T G T C A C T A G A C G T A G C T A G T C A C G T A T G C A C T G A C T G A G T C A C T G A C G T A C G T
C A G T A C G T A G T C T G A C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A T C G T A C G G C T A C A T G A G C T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:5
Score:0.51
Offset:7
Orientation:forward strand
Alignment:AGTTCTCGGCGTT
-------TGCGTG
 G T C A C T A G A C G T A G C T A G T C A C G T A T G C A C T G A C T G A G T C A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T A C T G A G T C A C T G A C G T A C T G

PB0143.1_Klf7_2/Jaspar

Match Rank:6
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:AGTTCTCGGCGTT-----
-NNNTNGGGCGTATNNTN
 G T C A C T A G A C G T A G C T A G T C A C G T A T G C A C T G A C T G A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G T C A C G T A A C T G G C A T C A G T C T A G A C T G A C T G G A T C C T A G A C G T G C T A G C A T T C A G G A T C A G C T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:7
Score:0.49
Offset:-5
Orientation:forward strand
Alignment:-----AGTTCTCGGCGTT
CGAACAGTGCTCACTAT-
 A C G T A C G T A C G T A C G T A C G T G T C A C T A G A C G T A G C T A G T C A C G T A T G C A C T G A C T G A G T C A C T G A C G T A C G T
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:8
Score:0.49
Offset:3
Orientation:reverse strand
Alignment:AGTTCTCGGCGTT
---DCTCAGCAGG
 G T C A C T A G A C G T A G C T A G T C A C G T A T G C A C T G A C T G A G T C A C T G A C G T A C G T
A C G T A C G T A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.49
Offset:-3
Orientation:reverse strand
Alignment:---AGTTCTCGGCGTT
BCNGGTTCTAGANCN-
 A C G T A C G T A C G T G T C A C T A G A C G T A G C T A G T C A C G T A T G C A C T G A C T G A G T C A C T G A C G T A C G T
A G C T T G A C C T A G C A T G C T A G G A C T A C G T A G T C A G C T C T G A T A C G T C G A C G A T A G T C G A C T A C G T

POL006.1_BREu/Jaspar

Match Rank:10
Score:0.48
Offset:7
Orientation:reverse strand
Alignment:AGTTCTCGGCGTT--
-------GGCGCGCT
 G T C A C T A G A C G T A G C T A G T C A C G T A T G C A C T G A C T G A G T C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T