Information for 11-CTCMGCTGTCTGC (Motif 22)

A G T C A G C T A T G C G T C A A T C G A T G C G C A T A T C G A G C T A G T C A G C T A T C G T G A C
Reverse Opposite:
A C T G A T G C T C G A T A C G C T G A T A G C C G T A A T C G A T G C C A G T T A C G T C G A T A C G
p-value:1e-7
log p-value:-1.772e+01
Information Content per bp:1.661
Number of Target Sequences with motif38.0
Percentage of Target Sequences with motif4.35%
Number of Background Sequences with motif729.7
Percentage of Background Sequences with motif1.53%
Average Position of motif in Targets48.3 +/- 25.4bp
Average Position of motif in Background48.4 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:1
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CTCMGCTGTCTGC
--CAGCTGTT---
 A G T C A G C T A T G C G T C A A T C G A T G C G C A T A T C G A G C T A G T C A G C T A T C G T G A C
A C G T A C G T A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CTCMGCTGTCTGC
NNGCAGCTGTC---
 A C G T A G T C A G C T A T G C G T C A A T C G A T G C G C A T A T C G A G C T A G T C A G C T A T C G T G A C
A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T A C G T A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CTCMGCTGTCTGC
NNGCAGCTGTT---
 A C G T A G T C A G C T A T G C G T C A A T C G A T G C G C A T A T C G A G C T A G T C A G C T A T C G T G A C
A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.62
Offset:5
Orientation:forward strand
Alignment:CTCMGCTGTCTGC
-----CTGTCTGG
 A G T C A G C T A T G C G T C A A T C G A T G C G C A T A T C G A G C T A G T C A G C T A T C G T G A C
A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CTCMGCTGTCTGC
NAHCAGCTGD----
 A C G T A G T C A G C T A T G C G T C A A T C G A T G C G C A T A T C G A G C T A G T C A G C T A T C G T G A C
G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CTCMGCTGTCTGC
---VBSYGTCTGG
 A G T C A G C T A T G C G T C A A T C G A T G C G C A T A T C G A G C T A G T C A G C T A T C G T G A C
A C G T A C G T A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CTCMGCTGTCTGC
---NGCTN-----
 A G T C A G C T A T G C G T C A A T C G A T G C G C A T A T C G A G C T A G T C A G C T A T C G T G A C
A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CTCMGCTGTCTGC
TGCAGCTGTCCCT
 A G T C A G C T A T G C G T C A A T C G A T G C G C A T A T C G A G C T A G T C A G C T A T C G T G A C
G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T

PB0060.1_Smad3_1/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CTCMGCTGTCTGC-----
-NNTNNTGTCTGGNNTNG
 A G T C A G C T A T G C G T C A A T C G A T G C G C A T A T C G A G C T A G T C A G C T A T C G T G A C A C G T A C G T A C G T A C G T A C G T
A C G T C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.59
Offset:4
Orientation:forward strand
Alignment:CTCMGCTGTCTGC
----GCTGTG---
 A G T C A G C T A T G C G T C A A T C G A T G C G C A T A T C G A G C T A G T C A G C T A T C G T G A C
A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T