Information for 1-CGGCTGTGGGGTC (Motif 1)

A G T C C T A G A C T G A G T C C G A T A C T G A C G T A C T G A C T G C T A G A C T G A C G T A G T C
Reverse Opposite:
A C T G C G T A G T A C A G T C A G T C A G T C C G T A A G T C C G T A A C T G A G T C A G T C A C T G
p-value:1e-16
log p-value:-3.711e+01
Information Content per bp:1.913
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets61.4 +/- 18.7bp
Average Position of motif in Background45.3 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1/MA0002.2/Jaspar

Match Rank:1
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CGGCTGTGGGGTC
-GTCTGTGGTTT-
 A G T C C T A G A C T G A G T C C G A T A C T G A C G T A C T G A C T G C T A G A C T G A C G T A G T C
A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CGGCTGTGGGGTC
--GCTGTGGTTT-
 A G T C C T A G A C T G A G T C C G A T A C T G A C G T A C T G A C T G C T A G A C T G A C G T A G T C
A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CGGCTGTGGGGTC
--GCTGTG-----
 A G T C C T A G A C T G A G T C C G A T A C T G A C G T A C T G A C T G C T A G A C T G A C G T A G T C
A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T

PB0025.1_Glis2_1/Jaspar

Match Rank:4
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CGGCTGTGGGGTC----
-NTNTGGGGGGTCNNNA
 A G T C C T A G A C T G A G T C C G A T A C T G A C G T A C T G A C T G C T A G A C T G A C G T A G T C A C G T A C G T A C G T A C G T
A C G T G T A C G A C T T C A G A C G T C T A G C T A G C A T G C A T G A C T G A C T G A C G T T G A C A T C G C G T A C G A T C T G A

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CGGCTGTGGGGTC
CAGCTGTT-----
 A G T C C T A G A C T G A G T C C G A T A C T G A C G T A C T G A C T G C T A G A C T G A C G T A G T C
A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T A C G T A C G T A C G T

GLI2/MA0734.1/Jaspar

Match Rank:6
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CGGCTGTGGGGTC--
---CAGTGTGGTCGC
 A G T C C T A G A C T G A G T C C G A T A C T G A C G T A C T G A C T G C T A G A C T G A C G T A G T C A C G T A C G T
A C G T A C G T A C G T G A T C G C T A C A T G A C G T A T C G C A G T T A C G C T A G A C G T G T A C A C T G G A T C

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CGGCTGTGGGGTC
-NNHTGTGGTTWN
 A G T C C T A G A C T G A G T C C G A T A C T G A C G T A C T G A C T G C T A G A C T G A C G T A G T C
A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

PB0150.1_Mybl1_2/Jaspar

Match Rank:8
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CGGCTGTGGGGTC
CACGGCAGTTGGTNN
 A C G T A C G T A G T C C T A G A C T G A G T C C G A T A C T G A C G T A C T G A C T G C T A G A C T G A C G T A G T C
T G A C C G T A A G T C C A T G C T A G A G T C T C G A A C T G A C G T C A G T C T A G C T A G A C G T T A G C T A C G

ZNF354C/MA0130.1/Jaspar

Match Rank:9
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:CGGCTGTGGGGTC
-----GTGGAT--
 A G T C C T A G A C T G A G T C C G A T A C T G A C G T A C T G A C T G C T A G A C T G A C G T A G T C
A C G T A C G T A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T

PB0057.1_Rxra_1/Jaspar

Match Rank:10
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CGGCTGTGGGGTC------
--NTNNNGGGGTCANGNNN
 A G T C C T A G A C T G A G T C C G A T A C T G A C G T A C T G A C T G C T A G A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A