Information for 5-GGAGGAGGAGGCG (Motif 8)

A T C G C A T G T G C A C T A G A C T G T G C A T C A G A C T G G T C A T C A G T A C G G A T C T C A G
Reverse Opposite:
A G T C C T A G A T G C A G T C C A G T A G T C A G T C A C G T G T A C A G T C A C G T G A T C A T G C
p-value:1e-10
log p-value:-2.451e+01
Information Content per bp:1.741
Number of Target Sequences with motif36.0
Percentage of Target Sequences with motif4.04%
Number of Background Sequences with motif502.1
Percentage of Background Sequences with motif1.06%
Average Position of motif in Targets49.5 +/- 22.3bp
Average Position of motif in Background50.9 +/- 31.4bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EGR1/MA0162.2/Jaspar

Match Rank:1
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:GGAGGAGGAGGCG-
GGCGGGGGCGGGGG
 A T C G C A T G T G C A C T A G A C T G T G C A T C A G A C T G G T C A T C A G T A C G G A T C T C A G A C G T
A C T G T A C G G T A C C T A G C A T G T C A G C T A G A C T G G A T C C T A G C A T G T C A G C T A G T A C G

ZNF263/MA0528.1/Jaspar

Match Rank:2
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GGAGGAGGAGGCG--------
GGAGGAGGAGGGGGAGGAGGA
 A T C G C A T G T G C A C T A G A C T G T G C A T C A G A C T G G T C A T C A G T A C G G A T C T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C T A G C T G A C A T G T A C G G C T A C A T G T C A G T C G A T C A G C T A G C T A G C T A G T C A G C T G A C T A G C T A G C T G A C T A G C T A G C T G A

SP1/MA0079.3/Jaspar

Match Rank:3
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:GGAGGAGGAGGCG
GGGGGCGGGGC--
 A T C G C A T G T G C A C T A G A C T G T G C A T C A G A C T G G T C A T C A G T A C G G A T C T C A G
T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C A C G T A C G T

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.67
Offset:-8
Orientation:forward strand
Alignment:--------GGAGGAGGAGGCG
SMCAGTCWGAKGGAGGAGGC-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G C A T G T G C A C T A G A C T G T G C A T C A G A C T G G T C A T C A G T A C G G A T C T C A G
A T C G T G A C A T G C C T G A T C A G G A C T A G T C C G A T T C A G T C G A C A T G C T A G C T A G C G T A C T A G C T A G C T G A C T A G C T A G A T G C A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:5
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GGAGGAGGAGGCG-----
-NNNAAGGGGGCGGGNNN
 A T C G C A T G T G C A C T A G A C T G T G C A T C A G A C T G G T C A T C A G T A C G G A T C T C A G A C G T A C G T A C G T A C G T A C G T
A C G T T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:6
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GGAGGAGGAGGCG
RGKGGGCGGAGC--
 A C G T A T C G C A T G T G C A C T A G A C T G T G C A T C A G A C T G G T C A T C A G T A C G G A T C T C A G
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T A C G T

Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer

Match Rank:7
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GGAGGAGGAGGCG
-GTGGGGGAGGGG
 A T C G C A T G T G C A C T A G A C T G T G C A T C A G A C T G G T C A T C A G T A C G G A T C T C A G
A C G T C T A G G C A T A C T G A C T G C T A G A C T G A C T G G C T A C A T G A C T G C A T G A T C G

POL003.1_GC-box/Jaspar

Match Rank:8
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GGAGGAGGAGGCG
AGGGGGCGGGGCTG
 A C G T A T C G C A T G T G C A C T A G A C T G T G C A T C A G A C T G G T C A T C A G T A C G G A T C T C A G
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G

SP2/MA0516.1/Jaspar

Match Rank:9
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GGAGGAGGAGGCG-
GGGNGGGGGCGGGGC
 A C G T A T C G C A T G T G C A C T A G A C T G T G C A T C A G A C T G G T C A T C A G T A C G G A T C T C A G A C G T
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C

PB0097.1_Zfp281_1/Jaspar

Match Rank:10
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GGAGGAGGAGGCG--
GGGGGGGGGGGGGGA
 A T C G C A T G T G C A C T A G A C T G T G C A T C A G A C T G G T C A T C A G T A C G G A T C T C A G A C G T A C G T
A C T G C T A G C A T G C A T G A C T G C A T G C A T G C T A G C T A G C A T G A T C G C A T G C A T G T C A G G C T A