Information for 5-CAGGGCGTAGCCCGCT (Motif 19)

A T G C C G T A A C T G A T C G A C T G A G T C A C T G A C G T C G T A A C T G A G T C A G T C A T G C A C T G A G T C A C G T
Reverse Opposite:
C G T A A C T G A G T C A T C G C T A G A C T G A G T C A C G T G T C A A G T C A C T G A G T C A T G C G T A C A C G T A T C G
p-value:1e-8
log p-value:-1.910e+01
Information Content per bp:1.884
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.45%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.8 +/- 20.2bp
Average Position of motif in Background36.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:1
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CAGGGCGTAGCCCGCT
NNVDGGGYGGGGCYN---
 A C G T A C G T A T G C C G T A A C T G A T C G A C T G A G T C A C T G A C G T C G T A A C T G A G T C A G T C A T G C A C T G A G T C A C G T
T A C G T G A C T C A G C T G A A C T G A C T G A C T G A G C T A C T G A C T G C T A G A C T G A G T C A G T C C T G A A C G T A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:2
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CAGGGCGTAGCCCGCT
RGKGGGCGGAGC-----
 A C G T A T G C C G T A A C T G A T C G A C T G A G T C A C T G A C G T C G T A A C T G A G T C A G T C A T G C A C T G A G T C A C G T
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T A C G T A C G T A C G T A C G T

Klf12/MA0742.1/Jaspar

Match Rank:3
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CAGGGCGTAGCCCGCT
NANAAGGGCGTGGTC----
 A C G T A C G T A C G T A T G C C G T A A C T G A T C G A C T G A G T C A C T G A C G T C G T A A C T G A G T C A G T C A T G C A C T G A G T C A C G T
C G T A C G T A C G A T C G T A C G T A C T A G T C A G C T A G G A T C C A T G A C G T A T C G C A T G A G C T G T A C A C G T A C G T A C G T A C G T

KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer

Match Rank:4
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CAGGGCGTAGCCCGCT
MKGGGYGTGGCC----
 A T G C C G T A A C T G A T C G A C T G A G T C A C T G A C G T C G T A A C T G A G T C A G T C A T G C A C T G A G T C A C G T
G T A C C A G T A C T G A C T G A C T G G A T C A C T G A C G T A C T G A C T G A G T C G A T C A C G T A C G T A C G T A C G T

PB0180.1_Sp4_2/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CAGGGCGTAGCCCGCT
CAAAGGCGTGGCCAG--
 A C G T A T G C C G T A A C T G A T C G A C T G A G T C A C T G A C G T C G T A A C T G A G T C A G T C A T G C A C T G A G T C A C G T
A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G A C G T A C G T

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:6
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CAGGGCGTAGCCCGCT
-DGGGYGKGGC-----
 A T G C C G T A A C T G A T C G A C T G A G T C A C T G A C G T C G T A A C T G A G T C A G T C A T G C A C T G A G T C A C G T
A C G T C G T A C T A G A C T G A C T G G A C T C T A G C A G T C T A G C A T G G A T C A C G T A C G T A C G T A C G T A C G T

Klf4/MA0039.2/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CAGGGCGTAGCCCGCT
-TGGGTGGGGC-----
 A T G C C G T A A C T G A T C G A C T G A G T C A C T G A C G T C G T A A C T G A G T C A G T C A T G C A C T G A G T C A C G T
A C G T C G A T T C A G C T A G A T C G G A C T C A T G A C T G C T A G A C T G A G T C A C G T A C G T A C G T A C G T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CAGGGCGTAGCCCGCT
GGGGGCGGGGCC----
 A T G C C G T A A C T G A T C G A C T G A G T C A C T G A C G T C G T A A C T G A G T C A G T C A T G C A C T G A G T C A C G T
T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:9
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:CAGGGCGTAGCCCGCT
-----CGGAGC-----
 A T G C C G T A A C T G A T C G A C T G A G T C A C T G A C G T C G T A A C T G A G T C A G T C A T G C A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T

PB0143.1_Klf7_2/Jaspar

Match Rank:10
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CAGGGCGTAGCCCGCT
NNNTNGGGCGTATNNTN--
 A C G T A C G T A C G T A T G C C G T A A C T G A T C G A C T G A G T C A C T G A C G T C G T A A C T G A G T C A G T C A T G C A C T G A G T C A C G T
G T C A C G T A A C T G G C A T C A G T C T A G A C T G A C T G G A T C C T A G A C G T G C T A G C A T T C A G G A T C A G C T A C G T A C G T A C G T