Information for 5-TCACAGGCCC (Motif 17)

C A G T A T G C C G T A T A G C C G T A C T A G A C T G A T G C T A G C G A T C
Reverse Opposite:
C T A G A T C G T A C G T G A C G A T C G C A T A T C G G C A T T A C G G T C A
p-value:1e-8
log p-value:-1.955e+01
Information Content per bp:1.654
Number of Target Sequences with motif69.0
Percentage of Target Sequences with motif7.74%
Number of Background Sequences with motif1693.5
Percentage of Background Sequences with motif3.57%
Average Position of motif in Targets46.6 +/- 27.3bp
Average Position of motif in Background51.1 +/- 27.8bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:1
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TCACAGGCCC
GTCACATGAY-
 A C G T C A G T A T G C C G T A T A G C C G T A C T A G A C T G A T G C T A G C G A T C
T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TCACAGGCCC
-CACAGN---
 C A G T A T G C C G T A T A G C C G T A C T A G A C T G A T G C T A G C G A T C
A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:3
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:TCACAGGCCC-------
---CAGGCCNNGGCCNN
 C A G T A T G C C G T A T A G C C G T A C T A G A C T G A T G C T A G C G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

PH0141.1_Pknox2/Jaspar

Match Rank:4
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----TCACAGGCCC--
NNATTGACAGGTGCTT
 A C G T A C G T A C G T A C G T C A G T A T G C C G T A T A G C C G T A C T A G A C T G A T G C T A G C G A T C A C G T A C G T
T C G A C A G T C G T A C A G T A G C T C T A G C G T A A G T C C T G A C A T G A T C G A G C T T A C G A G T C G A C T C G A T

USF2/MA0526.1/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TCACAGGCCC
GGTCACATGAC-
 A C G T A C G T C A G T A T G C C G T A T A G C C G T A C T A G A C T G A T G C T A G C G A T C
C T A G T C A G A G C T A G T C C G T A A G T C T C G A A C G T A C T G T C G A A G T C A C G T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:6
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TCACAGGCCC
ACWTCAAAGG---
 A C G T A C G T A C G T C A G T A T G C C G T A T A G C C G T A C T A G A C T G A T G C T A G C G A T C
C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G A C G T A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.60
Offset:4
Orientation:forward strand
Alignment:TCACAGGCCC--
----AGGCCTNG
 C A G T A T G C C G T A T A G C C G T A C T A G A C T G A T G C T A G C G A T C A C G T A C G T
A C G T A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---TCACAGGCCC
ACATCAAAGG---
 A C G T A C G T A C G T C A G T A T G C C G T A T A G C C G T A C T A G A C T G A T G C T A G C G A T C
C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:9
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TCACAGGCCC
ACATCAAAGGNA-
 A C G T A C G T A C G T C A G T A T G C C G T A T A G C C G T A C T A G A C T G A T G C T A G C G A T C
C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A A C G T

Mitf/MA0620.1/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TCACAGGCCC
GGTCACGTGG--
 A C G T A C G T C A G T A T G C C G T A T A G C C G T A C T A G A C T G A T G C T A G C G A T C
C T A G T C A G A C G T T G A C G T C A A G T C T C A G G C A T A C T G T C A G A C G T A C G T