Information for 3-GCGCAAAAGA (Motif 10)

T A C G T G A C C T A G T A G C T G C A C T G A T G C A C G T A A C T G G T C A
Reverse Opposite:
C A G T T G A C G C A T A C G T G A C T A C G T A T C G G A T C A C T G A T G C
p-value:1e-9
log p-value:-2.193e+01
Information Content per bp:1.686
Number of Target Sequences with motif52.0
Percentage of Target Sequences with motif5.84%
Number of Background Sequences with motif1028.3
Percentage of Background Sequences with motif2.17%
Average Position of motif in Targets51.2 +/- 28.6bp
Average Position of motif in Background49.8 +/- 30.9bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F(E2F)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GCGCAAAAGA
TTCGCGCGAAAA-
 A C G T A C G T A C G T T A C G T G A C C T A G T A G C T G C A C T G A T G C A C G T A A C T G G T C A
A G C T A G C T T A G C A T C G A G T C A C T G A T G C A T C G T C G A C T G A T C G A C T G A A C G T

E2F1/MA0024.3/Jaspar

Match Rank:2
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----GCGCAAAAGA
TTTGGCGCCAAA--
 A C G T A C G T A C G T A C G T T A C G T G A C C T A G T A G C T G C A C T G A T G C A C G T A A C T G G T C A
G C A T C G A T C A G T T C A G A T C G A T G C C T A G A T G C A T G C G C T A G C T A C G T A A C G T A C G T

PB0112.1_E2F2_2/Jaspar

Match Rank:3
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------GCGCAAAAGA-
CCTTCGGCGCCAAAAGG
 A C G T A C G T A C G T A C G T A C G T A C G T T A C G T G A C C T A G T A G C T G C A C T G A T G C A C G T A A C T G G T C A A C G T
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G

PB0141.1_Isgf3g_2/Jaspar

Match Rank:4
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GCGCAAAAGA------
--GCAAAACATTACTA
 T A C G T G A C C T A G T A G C T G C A C T G A T G C A C G T A A C T G G T C A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C T G T A G C C G T A C G T A C G T A C T G A T A G C C G T A A C G T C A G T C G T A G T A C G A C T C T G A

PB0208.1_Zscan4_2/Jaspar

Match Rank:5
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GCGCAAAAGA--
CGAAGCACACAAAATA
 A C G T A C G T A C G T A C G T T A C G T G A C C T A G T A G C T G C A C T G A T G C A C G T A A C T G G T C A A C G T A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GCGCAAAAGA
GGCGGGAAAH-
 A C G T T A C G T G A C C T A G T A G C T G C A C T G A T G C A C G T A A C T G G T C A
T A C G T A C G G T A C A T C G T A C G T A C G G T C A C T G A C G T A G A C T A C G T

PB0113.1_E2F3_2/Jaspar

Match Rank:7
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------GCGCAAAAGA-
AGCTCGGCGCCAAAAGC
 A C G T A C G T A C G T A C G T A C G T A C G T T A C G T G A C C T A G T A G C T G C A C T G A T G C A C G T A A C T G G T C A A C G T
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C

Sox3/MA0514.1/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GCGCAAAAGA
AAAACAAAGG-
 A C G T T A C G T G A C C T A G T A G C T G C A C T G A T G C A C G T A A C T G G T C A
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T

CEBPG/MA0838.1/Jaspar

Match Rank:9
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GCGCAAAAGA
ATTGCGCAAT---
 A C G T A C G T A C G T T A C G T G A C C T A G T A G C T G C A C T G A T G C A C G T A A C T G G T C A
T C G A C A G T C A G T C T A G G A T C C T A G G A T C C T G A C G T A A G C T A C G T A C G T A C G T

PB0121.1_Foxj3_2/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GCGCAAAAGA-----
AACACCAAAACAAAGGA
 A C G T A C G T T A C G T G A C C T A G T A G C T G C A C T G A T G C A C G T A A C T G G T C A A C G T A C G T A C G T A C G T A C G T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A