p-value: | 1e-8 |
log p-value: | -2.062e+01 |
Information Content per bp: | 1.790 |
Number of Target Sequences with motif | 4.0 |
Percentage of Target Sequences with motif | 0.69% |
Number of Background Sequences with motif | 0.7 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 65.8 +/- 23.4bp |
Average Position of motif in Background | 34.4 +/- 3.2bp |
Strand Bias (log2 ratio + to - strand density) | -0.6 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PB0152.1_Nkx3-1_2/Jaspar
Match Rank: | 1 |
Score: | 0.60 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CACAGTACTGTGC-- TTCNAAGTACTTNNNNN |
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POL009.1_DCE_S_II/Jaspar
Match Rank: | 2 |
Score: | 0.58 |
Offset: | 6 |
Orientation: | forward strand |
Alignment: | CACAGTACTGTGC ------GCTGTG- |
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HNF4G/MA0484.1/Jaspar
Match Rank: | 3 |
Score: | 0.54 |
Offset: | -6 |
Orientation: | forward strand |
Alignment: | ------CACAGTACTGTGC AGAGTCCAAAGTCCA---- |
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HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer
Match Rank: | 4 |
Score: | 0.54 |
Offset: | -7 |
Orientation: | forward strand |
Alignment: | -------CACAGTACTGTGC CANAGNNCAAAGTCCA---- |
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PB0091.1_Zbtb3_1/Jaspar
Match Rank: | 5 |
Score: | 0.53 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CACAGTACTGTGC---- NNNANTGCAGTGCNNTT |
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Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer
Match Rank: | 6 |
Score: | 0.51 |
Offset: | -5 |
Orientation: | reverse strand |
Alignment: | -----CACAGTACTGTGC--- NTTMRCACNNNVSTGYKAANT |
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SOX8/MA0868.1/Jaspar
Match Rank: | 7 |
Score: | 0.50 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --CACAGTACTGTGC- AACAATGTGCAGTGTT |
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PH0117.1_Nkx3-1/Jaspar
Match Rank: | 8 |
Score: | 0.50 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---CACAGTACTGTGC- NATTTAAGTACTTANNA |
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RUNX1/MA0002.2/Jaspar
Match Rank: | 9 |
Score: | 0.49 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----CACAGTACTGTGC AAACCACAGAN------ |
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Hnf4a/MA0114.3/Jaspar
Match Rank: | 10 |
Score: | 0.48 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----CACAGTACTGTGC GGGGTCAAAGTCCAAT-- |
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