Information for 11-BCCCCTDVTGTTGAGG (Motif 19)

A C T G A T G C G T A C A T G C A G T C A C G T C A G T T A C G C G A T C T A G A C G T A C G T A T C G T G C A A C T G T A C G
Reverse Opposite:
A G T C G T A C A C G T A T G C C G T A T G C A A G T C C G T A A G T C G T C A G T C A A C T G A T C G A C T G A T C G T G A C
p-value:1e-10
log p-value:-2.313e+01
Information Content per bp:1.760
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.87%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets57.4 +/- 19.4bp
Average Position of motif in Background62.7 +/- 17.6bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:BCCCCTDVTGTTGAGG
CCCCCTGCTGTG----
 A C T G A T G C G T A C A T G C A G T C A C G T C A G T T A C G C G A T C T A G A C G T A C G T A T C G T G C A A C T G T A C G
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.58
Offset:-8
Orientation:forward strand
Alignment:--------BCCCCTDVTGTTGAGG
CNNBRGCGCCCCCTGSTGGC----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C G T A C A T G C A G T C A C G T C A G T T A C G C G A T C T A G A C G T A C G T A T C G T G C A A C T G T A C G
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C A C G T A C G T A C G T A C G T

CTCF/MA0139.1/Jaspar

Match Rank:3
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----BCCCCTDVTGTTGAGG
TAGCGCCCCCTGGTGGCCA--
 A C G T A C G T A C G T A C G T A C G T A C T G A T G C G T A C A T G C A G T C A C G T C A G T T A C G C G A T C T A G A C G T A C G T A T C G T G C A A C T G T A C G
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A A C G T A C G T

Znf423/MA0116.1/Jaspar

Match Rank:4
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-BCCCCTDVTGTTGAGG
GGCACCCAGGGGTGC--
 A C G T A C T G A T G C G T A C A T G C A G T C A C G T C A G T T A C G C G A T C T A G A C G T A C G T A T C G T G C A A C T G T A C G
T C A G A T C G G T A C G T C A A G T C A G T C G A T C C G T A C T A G A C T G A C T G A C T G A C G T A C T G G T A C A C G T A C G T

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:5
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--BCCCCTDVTGTTGAGG
TTCCCCCTAC--------
 A C G T A C G T A C T G A T G C G T A C A T G C A G T C A C G T C A G T T A C G C G A T C T A G A C G T A C G T A T C G T G C A A C T G T A C G
A G C T G A C T G T A C G T A C A T G C G T A C G T A C A C G T G T A C T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.52
Offset:-6
Orientation:forward strand
Alignment:------BCCCCTDVTGTTGAGG
ANAGTGCCACCTGGTGGCCA--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C G T A C A T G C A G T C A C G T C A G T T A C G C G A T C T A G A C G T A C G T A T C G T G C A A C T G T A C G
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:7
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--BCCCCTDVTGTTGAGG
GGCCYCCTGCTGDGH---
 A C G T A C G T A C T G A T G C G T A C A T G C A G T C A C G T C A G T T A C G C G A T C T A G A C G T A C G T A T C G T G C A A C T G T A C G
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T A C G T A C G T

ZIC1/MA0696.1/Jaspar

Match Rank:8
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--BCCCCTDVTGTTGAGG
GACCCCCCGCTGTG----
 A C G T A C G T A C T G A T G C G T A C A T G C A G T C A C G T C A G T T A C G C G A T C T A G A C G T A C G T A T C G T G C A A C T G T A C G
A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G A C G T A C G T A C G T A C G T

ZIC4/MA0751.1/Jaspar

Match Rank:9
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--BCCCCTDVTGTTGAGG
GACCCCCCGCTGTGC---
 A C G T A C G T A C T G A T G C G T A C A T G C A G T C A C G T C A G T T A C G C G A T C T A G A C G T A C G T A T C G T G C A A C T G T A C G
A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C A C G T A C G T A C G T

MZF1/MA0056.1/Jaspar

Match Rank:10
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:BCCCCTDVTGTTGAGG
TCCCCA----------
 A C T G A T G C G T A C A T G C A G T C A C G T C A G T T A C G C G A T C T A G A C G T A C G T A T C G T G C A A C T G T A C G
A G C T A G T C G T A C A G T C G T A C T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T