Information for 13-GGATTTGCGC (Motif 36)

A C T G A C T G C G T A A C G T A G C T C G A T A C T G A G T C A C T G A G T C
Reverse Opposite:
A C T G A G T C A C T G A G T C C G T A C T G A C G T A A C G T A G T C A G T C
p-value:1e-3
log p-value:-7.304e+00
Information Content per bp:1.946
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif13.8
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets46.0 +/- 25.4bp
Average Position of motif in Background43.2 +/- 27.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GGATTTGCGC
GGATTAGC--
 A C T G A C T G C G T A A C G T A G C T C G A T A C T G A G T C A C T G A G T C
T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C A C G T A C G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:2
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GGATTTGCGC
VRGGATTARN--
 A C G T A C G T A C T G A C T G C G T A A C G T A G C T C G A T A C T G A G T C A C T G A G T C
T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C A C G T A C G T

PH0139.1_Pitx3/Jaspar

Match Rank:3
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----GGATTTGCGC--
AGGGGGATTAGCTGCC
 A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C G T A G C T C G A T A C T G A G T C A C T G A G T C A C G T A C G T
T C G A C T A G T A C G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C A T G A T G C A C G T C T A G A T G C A T G C

PH0035.1_Gsc/Jaspar

Match Rank:4
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----GGATTTGCGC--
NNAAGGGATTAACGANT
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C G T A G C T C G A T A C T G A G T C A C T G A G T C A C G T A C G T
A C G T C G T A G T C A C T G A T A C G C T A G C T A G G T C A A C G T A G C T C G T A C T G A A G T C C A T G C G T A A G C T C G A T

GSC/MA0648.1/Jaspar

Match Rank:5
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GGATTTGCGC
NNGGATTAGN--
 A C G T A C G T A C T G A C T G C G T A A C G T A G C T C G A T A C T G A G T C A C T G A G T C
C T A G T A C G T C A G T C A G T G C A A C G T G A C T C T G A C T A G A T G C A C G T A C G T

PITX3/MA0714.1/Jaspar

Match Rank:6
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GGATTTGCGC
GGGATTANN--
 A C G T A C T G A C T G C G T A A C G T A G C T C G A T A C T G A G T C A C T G A G T C
C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G A C G T A C G T

PH0015.1_Crx/Jaspar

Match Rank:7
Score:0.64
Offset:-6
Orientation:forward strand
Alignment:------GGATTTGCGC
CGTTGGGGATTAGCCT
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C G T A G C T C G A T A C T G A G T C A C T G A G T C
A G T C A C T G C G A T C G A T T A C G T A C G C T A G A C T G G T C A A C G T C G A T C G T A C T A G A G T C A T G C C A G T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:8
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GGATTTGCGC
NGGGATTA----
 A C G T A C G T A C T G A C T G C G T A A C G T A G C T C G A T A C T G A G T C A C T G A G T C
T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A A C G T A C G T A C G T A C G T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:9
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GGATTTGCGC
RGGATTAR---
 A C G T A C T G A C T G C G T A A C G T A G C T C G A T A C T G A G T C A C T G A G T C
T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G A C G T A C G T A C G T

GSC2/MA0891.1/Jaspar

Match Rank:10
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GGATTTGCGC
GNGGATTAGN--
 A C G T A C G T A C T G A C T G C G T A A C G T A G C T C G A T A C T G A G T C A C T G A G T C
C T A G T A G C T C A G C A T G T G C A C G A T C G A T C G T A C T A G A C T G A C G T A C G T