Information for 6-GCATAGGACT (Motif 24)

A C T G G T A C C G T A C G A T C G T A A C T G A C T G C T G A A G T C A C G T
Reverse Opposite:
C G T A A C T G A G C T A G T C G T A C G A C T G C T A C G A T A C T G G T A C
p-value:1e-8
log p-value:-1.883e+01
Information Content per bp:1.854
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.61%
Number of Background Sequences with motif58.1
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets59.0 +/- 26.2bp
Average Position of motif in Background51.9 +/- 29.7bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0134.1_Hnf4a_2/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GCATAGGACT------
NNATTGGACTTTNGNN
 A C T G G T A C C G T A C G A T C G T A A C T G A C T G C T G A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.59
Offset:4
Orientation:forward strand
Alignment:GCATAGGACT--
----AGGCCTNG
 A C T G G T A C C G T A C G A T C G T A A C T G A C T G C T G A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G

Zfx/MA0146.2/Jaspar

Match Rank:3
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GCATAGGACT-
GGGGCCGAGGCCTG
 A C G T A C G T A C G T A C T G G T A C C G T A C G A T C G T A A C T G A C T G C T G A A G T C A C G T A C G T
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:4
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GCATAGGACT
RTCATGTGAC-
 A C G T A C T G G T A C C G T A C G A T C G T A A C T G A C T G C T G A A G T C A C G T
T C A G A G C T A T G C C G T A A G C T T C A G C A G T A C T G C T G A A G T C A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:5
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GCATAGGACT
--CTAGGCCT
 A C T G G T A C C G T A C G A T C G T A A C T G A C T G C T G A A G T C A C G T
A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T

NEUROD2/MA0668.1/Jaspar

Match Rank:6
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GCATAGGACT
ACCATATGGC-
 A C G T A C T G G T A C C G T A C G A T C G T A A C T G A C T G C T G A A G T C A C G T
C T G A T G A C G T A C C T G A A C G T C T G A G A C T A T C G A C T G A G T C A C G T

USF2/MA0526.1/Jaspar

Match Rank:7
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GCATAGGACT
GTCATGTGACC
 A C G T A C T G G T A C C G T A C G A T C G T A A C T G A C T G C T G A A G T C A C G T
T C A G A G C T A G T C C G T A A G C T A C T G A C G T A C T G T C G A A G T C G A T C

NEUROG2/MA0669.1/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GCATAGGACT
AACATATGTC-
 A C G T A C T G G T A C C G T A C G A T C G T A A C T G A C T G C T G A A G T C A C G T
T C G A T G C A G A T C C T G A A C G T T G C A G C A T A C T G A G C T A G T C A C G T

PB0114.1_Egr1_2/Jaspar

Match Rank:9
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----GCATAGGACT--
TGCGGAGTGGGACTGG
 A C G T A C G T A C G T A C G T A C T G G T A C C G T A C G A T C G T A A C T G A C T G C T G A A G T C A C G T A C G T A C G T
A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GCATAGGACT------
TTCNAAGTACTTNNNNN
 A C G T A C T G G T A C C G T A C G A T C G T A A C T G A C T G C T G A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C A G T A C G T A G T C T G A C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A T C G T A C G G C T A C A T G A G C T