Information for 14-TGCCCTGTCTTTG (Motif 22)

C G A T A C T G A G T C G A T C G T A C C G A T A C T G G A C T A T G C G C A T A C G T A G C T A C T G
Reverse Opposite:
T G A C C T G A T G C A C G T A T A C G C T G A T G A C C G T A C A T G C T A G T C A G T G A C G C T A
p-value:1e-8
log p-value:-1.943e+01
Information Content per bp:1.646
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif3.71%
Number of Background Sequences with motif395.5
Percentage of Background Sequences with motif0.82%
Average Position of motif in Targets55.6 +/- 20.4bp
Average Position of motif in Background49.9 +/- 29.0bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:1
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TGCCCTGTCTTTG----
BTGACCTCTNNHTGACCY
 A C G T C G A T A C T G A G T C G A T C G T A C C G A T A C T G G A C T A T G C G C A T A C G T A G C T A C T G A C G T A C G T A C G T A C G T
A T C G A C G T A T C G T G C A G T A C A G T C A G C T A T G C C G A T T A C G A T G C G T A C G A C T T A C G T G C A G T A C G A T C A G C T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TGCCCTGTCTTTG
TGCCCAGNHW---
 C G A T A C T G A G T C G A T C G T A C C G A T A C T G G A C T A T G C G C A T A C G T A G C T A C T G
C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T A C G T A C G T

RARA::RXRA/MA0159.1/Jaspar

Match Rank:3
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TGCCCTGTCTTTG----
TGACCTCTCNNTGACCT
 C G A T A C T G A G T C G A T C G T A C C G A T A C T G G A C T A T G C G C A T A C G T A G C T A C T G A C G T A C G T A C G T A C G T
G A C T T A C G G T C A T G A C A G T C A C G T A T G C G A C T A G T C A T G C T C A G A G C T T A C G G T C A G T A C A G T C A G C T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:4
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:TGCCCTGTCTTTG
---BNTGDCCTTG
 C G A T A C T G A G T C G A T C G T A C C G A T A C T G G A C T A T G C G C A T A C G T A G C T A C T G
A C G T A C G T A C G T A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G

Rarb(var.2)/MA0858.1/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TGCCCTGTCTTTG----
TGACCTTTANTTGACCT
 C G A T A C T G A G T C G A T C G T A C C G A T A C T G G A C T A T G C G C A T A C G T A G C T A C T G A C G T A C G T A C G T A C G T
G A C T C T A G T G C A T G A C A G T C G A C T A G C T G C A T T C G A A C T G C A G T A G C T A T C G C T G A G T A C A T G C A G C T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TGCCCTGTCTTTG
TGACCTYA-----
 C G A T A C T G A G T C G A T C G T A C C G A T A C T G G A C T A T G C G C A T A C G T A G C T A C T G
A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:7
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:TGCCCTGTCTTTG--
-----TGACCTTGAV
 C G A T A C T G A G T C G A T C G T A C C G A T A C T G G A C T A T G C G C A T A C G T A G C T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A

Nr5a2/MA0505.1/Jaspar

Match Rank:8
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:TGCCCTGTCTTTG-----
---GCTGACCTTGAACTN
 C G A T A C T G A G T C G A T C G T A C C G A T A C T G G A C T A T G C G C A T A C G T A G C T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:9
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:TGCCCTGTCTTTG--
-----TGACCTTGAN
 C G A T A C T G A G T C G A T C G T A C C G A T A C T G G A C T A T G C G C A T A C G T A G C T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A

Nr2e1/MA0676.1/Jaspar

Match Rank:10
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:TGCCCTGTCTTTG
----TTGACTTTT
 C G A T A C T G A G T C G A T C G T A C C G A T A C T G G A C T A T G C G C A T A C G T A G C T A C T G
A C G T A C G T A C G T A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T