Information for 10-CTKWAARWWGGATWAM (Motif 20)

G T A C A C G T A C G T C G A T C G T A C G T A C T G A C G A T C G A T A C T G A T C G C G T A A C G T G C T A C G T A G T C A
Reverse Opposite:
A C G T A C G T C G A T C G T A A C G T A T G C A G T C C G T A C G T A A G C T A C G T A C G T G C T A G T C A C G T A A C T G
p-value:1e-8
log p-value:-2.064e+01
Information Content per bp:1.821
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.0 +/- 15.7bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0126.1_Obox6/Jaspar

Match Rank:1
Score:0.65
Offset:3
Orientation:forward strand
Alignment:CTKWAARWWGGATWAM--
---AAAAACGGATTATTG
 G T A C A C G T A C G T C G A T C G T A C G T A C T G A C G A T C G A T A C T G A T C G C G T A A C G T G C T A C G T A G T C A A C G T A C G T
A C G T A C G T A C G T G T C A G C T A C T G A G C T A C T A G T A G C C T A G A C T G G T C A A C G T G A C T C G T A C G A T G A C T A T C G

Dmbx1/MA0883.1/Jaspar

Match Rank:2
Score:0.64
Offset:3
Orientation:forward strand
Alignment:CTKWAARWWGGATWAM----
---TGAACCGGATTAATGAA
 G T A C A C G T A C G T C G A T C G T A C G T A C T G A C G A T C G A T A C T G A T C G C G T A A C G T G C T A C G T A G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A

PH0025.1_Dmbx1/Jaspar

Match Rank:3
Score:0.64
Offset:3
Orientation:forward strand
Alignment:CTKWAARWWGGATWAM----
---TGAACCGGATTAATGAA
 G T A C A C G T A C G T C G A T C G T A C G T A C T G A C G A T C G A T A C T G A T C G C G T A A C G T G C T A C G T A G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A

Pitx1/MA0682.1/Jaspar

Match Rank:4
Score:0.63
Offset:8
Orientation:reverse strand
Alignment:CTKWAARWWGGATWAM
--------GGGATTAA
 G T A C A C G T A C G T C G A T C G T A C G T A C T G A C G A T C G A T A C T G A T C G C G T A A C G T G C T A C G T A G T C A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G C T A G C T A G G T C A C G A T A G C T C G T A C T G A

RHOXF1/MA0719.1/Jaspar

Match Rank:5
Score:0.62
Offset:8
Orientation:reverse strand
Alignment:CTKWAARWWGGATWAM
--------NGGATTAN
 G T A C A C G T A C G T C G A T C G T A C G T A C T G A C G A T C G A T A C T G A T C G C G T A A C G T G C T A C G T A G T C A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T

OTX2/MA0712.1/Jaspar

Match Rank:6
Score:0.62
Offset:8
Orientation:reverse strand
Alignment:CTKWAARWWGGATWAM
--------NGGATTAA
 G T A C A C G T A C G T C G A T C G T A C G T A C T G A C G A T C G A T A C T G A T C G C G T A A C G T G C T A C G T A G T C A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A T C A G C T A G G T C A A C G T G C A T C G T A C T G A

PH0125.1_Obox5_2/Jaspar

Match Rank:7
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:CTKWAARWWGGATWAM-----
----NANAGGGATTAATTATN
 G T A C A C G T A C G T C G A T C G T A C G T A C T G A C G A T C G A T A C T G A T C G C G T A A C G T G C T A C G T A G T C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A C T G A T C A G T C G A T C A G T C A G A C T G G C T A A C G T C G A T C G T A C G T A G C A T G A C T T C G A G C A T T G A C

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:8
Score:0.61
Offset:7
Orientation:reverse strand
Alignment:CTKWAARWWGGATWAM-
-------VRGGATTARN
 G T A C A C G T A C G T C G A T C G T A C G T A C T G A C G A T C G A T A C T G A T C G C G T A A C G T G C T A C G T A G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C

PITX3/MA0714.1/Jaspar

Match Rank:9
Score:0.61
Offset:8
Orientation:reverse strand
Alignment:CTKWAARWWGGATWAM-
--------GGGATTANN
 G T A C A C G T A C G T C G A T C G T A C G T A C T G A C G A T C G A T A C T G A T C G C G T A A C G T G C T A C G T A G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:10
Score:0.61
Offset:9
Orientation:reverse strand
Alignment:CTKWAARWWGGATWAM-
---------GGATTAGC
 G T A C A C G T A C G T C G A T C G T A C G T A C T G A C G A T C G A T A C T G A T C G C G T A A C G T G C T A C G T A G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C