Information for 7-AKGGTGGTCACYCTCC (Motif 11)

G T C A C A G T A C T G C A T G C G A T C T A G C A T G A C G T G T A C C T G A A G T C A G C T A G T C A C G T A T G C A G T C
Reverse Opposite:
T C A G T A C G G T C A C T A G C T G A A C T G A G C T A C T G G T C A G T A C A G T C C G T A G T A C G T A C G T C A A C G T
p-value:1e-10
log p-value:-2.379e+01
Information Content per bp:1.716
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.13%
Number of Background Sequences with motif9.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets68.3 +/- 15.2bp
Average Position of motif in Background59.7 +/- 31.1bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GLI2/MA0734.1/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-AKGGTGGTCACYCTCC
CAGTGTGGTCGC-----
 A C G T G T C A C A G T A C T G C A T G C G A T C T A G C A T G A C G T G T A C C T G A A G T C A G C T A G T C A C G T A T G C A G T C
G A T C G C T A C A T G A C G T A T C G C A G T T A C G C T A G A C G T G T A C A C T G G A T C A C G T A C G T A C G T A C G T A C G T

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:2
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---AKGGTGGTCACYCTCC
NNANTGGTGGTCTTNNN--
 A C G T A C G T A C G T G T C A C A G T A C T G C A T G C G A T C T A G C A T G A C G T G T A C C T G A A G T C A G C T A G T C A C G T A T G C A G T C
T C A G A G C T G T C A T G C A C G A T C T A G C T A G C A G T A T C G C A T G C A G T T G A C A C G T G A C T G T C A G C A T C T A G A C G T A C G T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:3
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AKGGTGGTCACYCTCC
AAYTAGGTCA------
 G T C A C A G T A C T G C A T G C G A T C T A G C A T G A C G T G T A C C T G A A G T C A G C T A G T C A C G T A T G C A G T C
G C T A C G T A A G T C A C G T T C G A T A C G A C T G A G C T A G T C T C G A A C G T A C G T A C G T A C G T A C G T A C G T

ZBTB7C/MA0695.1/Jaspar

Match Rank:4
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-AKGGTGGTCACYCTCC
NTCGGTGGTCGC-----
 A C G T G T C A C A G T A C T G C A T G C G A T C T A G C A T G A C G T G T A C C T G A A G T C A G C T A G T C A C G T A T G C A G T C
A C G T C A G T A G T C C A T G C A T G C A G T T C A G A C T G C A G T G A T C A T C G G A T C A C G T A C G T A C G T A C G T A C G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:5
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AKGGTGGTCACYCTCC
AAGGTGTKAA------
 G T C A C A G T A C T G C A T G C G A T C T A G C A T G A C G T G T A C C T G A A G T C A G C T A G T C A C G T A T G C A G T C
C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A A C G T A C G T A C G T A C G T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:6
Score:0.53
Offset:3
Orientation:forward strand
Alignment:AKGGTGGTCACYCTCC
---AAGGTCAC-----
 G T C A C A G T A C T G C A T G C G A T C T A G C A T G A C G T G T A C C T G A A G T C A G C T A G T C A C G T A T G C A G T C
A C G T A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T A C G T A C G T A C G T

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:7
Score:0.53
Offset:2
Orientation:forward strand
Alignment:AKGGTGGTCACYCTCC
--CNTGTTTACATA--
 G T C A C A G T A C T G C A T G C G A T C T A G C A T G A C G T G T A C C T G A A G T C A G C T A G T C A C G T A T G C A G T C
A C G T A C G T A T G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A G A T C G C T A A G C T C G T A A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:8
Score:0.52
Offset:2
Orientation:forward strand
Alignment:AKGGTGGTCACYCTCC
--AGRGGTCA------
 G T C A C A G T A C T G C A T G C G A T C T A G C A T G A C G T G T A C C T G A A G T C A G C T A G T C A C G T A T G C A G T C
A C G T A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--AKGGTGGTCACYCTCC
GARTGGTCATCGCCC---
 A C G T A C G T G T C A C A G T A C T G C A T G C G A T C T A G C A T G A C G T G T A C C T G A A G T C A G C T A G T C A C G T A T G C A G T C
T A C G C G T A T C A G G A C T C T A G A C T G C A G T T A G C T C G A A C G T G T A C C T A G A G T C A G T C G A T C A C G T A C G T A C G T

RORA/MA0071.1/Jaspar

Match Rank:10
Score:0.52
Offset:0
Orientation:forward strand
Alignment:AKGGTGGTCACYCTCC
ATCAAGGTCA------
 G T C A C A G T A C T G C A T G C G A T C T A G C A T G A C G T G T A C C T G A A G T C A G C T A G T C A C G T A T G C A G T C
C G T A G C A T T G A C C G T A C T G A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T