Information for 2-GGACGCCCCACGGAGC (Motif 7)

A C T G A C T G C G T A A G T C A C T G A G T C A G T C A G T C A G T C T C G A A G T C A C T G T A C G G T C A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T A G T C A G T C A C T G A C G T A C T G A C T G A C T G A C T G A G T C T A C G C G A T A G T C A G T C
p-value:1e-10
log p-value:-2.435e+01
Information Content per bp:1.870
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.52%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets35.2 +/- 12.8bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GLIS1/MA0735.1/Jaspar

Match Rank:1
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GGACGCCCCACGGAGC
AGACCCCCCACGAAGC
 A C T G A C T G C G T A A G T C A C T G A G T C A G T C A G T C A G T C T C G A A G T C A C T G T A C G G T C A A C T G A G T C
G T C A A C T G C G T A A T G C G T A C A T G C T A G C A G T C T G A C C T G A A G T C C A T G C G T A G C T A C A T G A T G C

GLIS3/MA0737.1/Jaspar

Match Rank:2
Score:0.71
Offset:1
Orientation:forward strand
Alignment:GGACGCCCCACGGAGC
-GACCCCCCACGAAG-
 A C T G A C T G C G T A A G T C A C T G A G T C A G T C A G T C A G T C T C G A A G T C A C T G T A C G G T C A A C T G A G T C
A C G T A C T G T C G A A G T C A G T C G A T C A G T C G T A C A G T C C T G A A G T C C T A G C G T A G T C A A T C G A C G T

GLIS2/MA0736.1/Jaspar

Match Rank:3
Score:0.69
Offset:1
Orientation:forward strand
Alignment:GGACGCCCCACGGAGC
-GACCCCCCGCGAAG-
 A C T G A C T G C G T A A G T C A C T G A G T C A G T C A G T C A G T C T C G A A G T C A C T G T A C G G T C A A C T G A G T C
A C G T A C T G T C G A A G T C G T A C G A T C G T A C G T A C G A T C C T A G A G T C C T A G C T G A G T C A A T C G A C G T

ZIC3/MA0697.1/Jaspar

Match Rank:4
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GGACGCCCCACGGAGC
-GACCCCCCGCTGCGC
 A C T G A C T G C G T A A G T C A C T G A G T C A G T C A G T C A G T C T C G A A G T C A C T G T A C G G T C A A C T G A G T C
A C G T A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C

ZIC4/MA0751.1/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GGACGCCCCACGGAGC
-GACCCCCCGCTGTGC
 A C T G A C T G C G T A A G T C A C T G A G T C A G T C A G T C A G T C T C G A A G T C A C T G T A C G G T C A A C T G A G T C
A C G T A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C

PB0052.1_Plagl1_1/Jaspar

Match Rank:6
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----GGACGCCCCACGGAGC
TTGGGGGCGCCCCTAG----
 A C G T A C G T A C G T A C G T A C T G A C T G C G T A A G T C A C T G A G T C A G T C A G T C A G T C T C G A A G T C A C T G T A C G G T C A A C T G A G T C
A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G A C G T A C G T A C G T A C G T

PB0204.1_Zfp740_2/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GGACGCCCCACGGAGC-
AAATTCCCCCCGGAAGT
 A C T G A C T G C G T A A G T C A C T G A G T C A G T C A G T C A G T C T C G A A G T C A C T G T A C G G T C A A C T G A G T C A C G T
C T G A C T G A C T G A C A G T G C A T G A T C G A T C A G T C A G T C A T G C A T G C T A C G A T C G C T G A C T G A T C A G A G C T

POL013.1_MED-1/Jaspar

Match Rank:8
Score:0.57
Offset:10
Orientation:reverse strand
Alignment:GGACGCCCCACGGAGC
----------CGGAGC
 A C T G A C T G C G T A A G T C A C T G A G T C A G T C A G T C A G T C T C G A A G T C A C T G T A C G G T C A A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GGACGCCCCACGGAGC
GGACCACCCACG----
 A C T G A C T G C G T A A G T C A C T G A G T C A G T C A G T C A G T C T C G A A G T C A C T G T A C G G T C A A C T G A G T C
C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G A C G T A C G T A C G T A C G T

PB0025.1_Glis2_1/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GGACGCCCCACGGAGC
TATCGACCCCCCACAG---
 A C G T A C G T A C G T A C T G A C T G C G T A A G T C A C T G A G T C A G T C A G T C A G T C T C G A A G T C A C T G T A C G G T C A A C T G A G T C
G A C T G C T A G C A T T A G C A C T G T G C A A G T C A G T C G A T C G A T C G A T C G A T C T G C A A G T C C T G A C A T G A C G T A C G T A C G T