Information for 9-CCCCCCGGGG (Motif 29)

T A G C G T A C A G T C T A G C G T A C T A G C A T C G T A C G A C T G T A C G
Reverse Opposite:
A G T C T G A C A T G C T A G C A T C G C A T G A T C G T A C G C A T G A T C G
p-value:1e-5
log p-value:-1.295e+01
Information Content per bp:1.653
Number of Target Sequences with motif290.0
Percentage of Target Sequences with motif30.08%
Number of Background Sequences with motif11320.5
Percentage of Background Sequences with motif23.61%
Average Position of motif in Targets50.6 +/- 26.0bp
Average Position of motif in Background49.8 +/- 29.7bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0102.1_Zic2_1/Jaspar

Match Rank:1
Score:0.91
Offset:-2
Orientation:reverse strand
Alignment:--CCCCCCGGGG---
ACCCCCCCGGGGGGN
 A C G T A C G T T A G C G T A C A G T C T A G C G T A C T A G C A T C G T A C G A C T G T A C G A C G T A C G T A C G T
T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G

PB0103.1_Zic3_1/Jaspar

Match Rank:2
Score:0.91
Offset:-2
Orientation:reverse strand
Alignment:--CCCCCCGGGG---
NCCCCCCCGGGGGGN
 A C G T A C G T T A G C G T A C A G T C T A G C G T A C T A G C A T C G T A C G A C T G T A C G A C G T A C G T A C G T
T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G

PB0101.1_Zic1_1/Jaspar

Match Rank:3
Score:0.91
Offset:-1
Orientation:reverse strand
Alignment:-CCCCCCGGGG---
CCCCCCCGGGGGNN
 A C G T T A G C G T A C A G T C T A G C G T A C T A G C A T C G T A C G A C T G T A C G A C G T A C G T A C G T
T A G C T G A C G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G C A G T T A C G

PB0204.1_Zfp740_2/Jaspar

Match Rank:4
Score:0.79
Offset:-5
Orientation:forward strand
Alignment:-----CCCCCCGGGG--
AAATTCCCCCCGGAAGT
 A C G T A C G T A C G T A C G T A C G T T A G C G T A C A G T C T A G C G T A C T A G C A T C G T A C G A C T G T A C G A C G T A C G T
C T G A C T G A C T G A C A G T G C A T G A T C G A T C A G T C A G T C A T G C A T G C T A C G A T C G C T G A C T G A T C A G A G C T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-CCCCCCGGGG-
GTCCCCAGGGGA
 A C G T T A G C G T A C A G T C T A G C G T A C T A G C A T C G T A C G A C T G T A C G A C G T
C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A

ZIC4/MA0751.1/Jaspar

Match Rank:6
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--CCCCCCGGGG---
GACCCCCCGCTGTGC
 A C G T A C G T T A G C G T A C A G T C T A G C G T A C T A G C A T C G T A C G A C T G T A C G A C G T A C G T A C G T
A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:7
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--CCCCCCGGGG---
NTCCCCTCAGGGANT
 A C G T A C G T T A G C G T A C A G T C T A G C G T A C T A G C A T C G T A C G A C T G T A C G A C G T A C G T A C G T
G A C T C G A T G A T C A T G C G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A C G C G T A G C T A G C A T

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:8
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-CCCCCCGGGG-
NGTCCCNNGGGA
 A C G T T A G C G T A C A G T C T A G C G T A C T A G C A T C G T A C G A C T G T A C G A C G T
C T A G A T C G G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:9
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-CCCCCCGGGG--
TGCCCNNAGGGCA
 A C G T T A G C G T A C A G T C T A G C G T A C T A G C A T C G T A C G A C T G T A C G A C G T A C G T
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:10
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--CCCCCCGGGG---
NTCGCCTCAGGCAAT
 A C G T A C G T T A G C G T A C A G T C T A G C G T A C T A G C A T C G T A C G A C T G T A C G A C G T A C G T A C G T
G C A T C G A T G A T C A T C G G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A G C C T G A C G T A C G A T