Information for 8-AGACGTGCAG (Motif 27)

G T C A C T A G C G T A A G T C A C T G A C G T A C T G A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G A G T C C G T A A G T C A C T G A C G T A G T C A C G T
p-value:1e-6
log p-value:-1.562e+01
Information Content per bp:1.939
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif19.6
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets59.9 +/- 14.7bp
Average Position of motif in Background61.6 +/- 27.6bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:1
Score:0.79
Offset:0
Orientation:forward strand
Alignment:AGACGTGCAG
RTACGTGC--
 G T C A C T A G C G T A A G T C A C T G A C G T A C T G A G T C C G T A A C T G
C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C A C G T A C G T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:2
Score:0.76
Offset:0
Orientation:forward strand
Alignment:AGACGTGCAG
GGACGTGC--
 G T C A C T A G C G T A A G T C A C T G A C G T A C T G A G T C C G T A A C T G
T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C A C G T A C G T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:3
Score:0.75
Offset:1
Orientation:forward strand
Alignment:AGACGTGCAG
-TACGTGCV-
 G T C A C T A G C G T A A G T C A C T G A C G T A C T G A G T C C G T A A C T G
A C G T A C G T C T G A G A T C A T C G G A C T T C A G G T A C T A G C A C G T

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:4
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--AGACGTGCAG
GGGTACGTGC--
 A C G T A C G T G T C A C T A G C G T A A G T C A C T G A C G T A C T G A G T C C G T A A C T G
C T A G A T C G T C A G C A G T C T G A A T G C A C T G A G C T A C T G G T A C A C G T A C G T

Npas2/MA0626.1/Jaspar

Match Rank:5
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-AGACGTGCAG
NACACGTGCN-
 A C G T G T C A C T A G C G T A A G T C A C T G A C G T A C T G A G T C C G T A A C T G
A C T G T G C A A G T C C G T A A G T C A C T G A C G T A C T G A T G C G A T C A C G T

Mlxip/MA0622.1/Jaspar

Match Rank:6
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:AGACGTGCAG
ACACGTGC--
 G T C A C T A G C G T A A G T C A C T G A C G T A C T G A G T C C G T A A C T G
G T C A A G T C C G T A A G T C A C T G A C G T A C T G T A G C A C G T A C G T

Arnt/MA0004.1/Jaspar

Match Rank:7
Score:0.66
Offset:1
Orientation:forward strand
Alignment:AGACGTGCAG
-CACGTG---
 G T C A C T A G C G T A A G T C A C T G A C G T A C T G A G T C C G T A A C T G
A C G T G T A C C T G A A G T C A C T G A C G T A C T G A C G T A C G T A C G T

Hes2/MA0616.1/Jaspar

Match Rank:8
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----AGACGTGCAG
TAACGACACGTGC--
 A C G T A C G T A C G T A C G T A C G T G T C A C T A G C G T A A G T C A C T G A C G T A C T G A G T C C G T A A C T G
A C G T C G T A C G T A T A G C A T C G C T G A G T A C C T G A G T A C C T A G A C G T C T A G G T A C A C G T A C G T

MNT/MA0825.1/Jaspar

Match Rank:9
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AGACGTGCAG
ACCACGTGCC-
 A C G T G T C A C T A G C G T A A G T C A C T G A C G T A C T G A G T C C G T A A C T G
C T G A T A G C G T A C C G T A A G T C C T A G A C G T A C T G T G A C G A T C A C G T

NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer

Match Rank:10
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AGACGTGCAG
NVCACGTG---
 A C G T G T C A C T A G C G T A A G T C A C T G A C G T A C T G A G T C C G T A A C T G
C G A T T G C A G T A C C G T A A G T C C T A G G A C T C A T G A C G T A C G T A C G T