Information for 4-GCGAACTTGA (Motif 18)

A C T G G A T C C T A G C G T A G T C A A T G C A C G T A C G T A C T G C G T A
Reverse Opposite:
A C G T A G T C G T C A C G T A A T C G A C G T A C G T A G T C C A T G G T A C
p-value:1e-8
log p-value:-1.930e+01
Information Content per bp:1.852
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.04%
Number of Background Sequences with motif35.4
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets59.0 +/- 28.4bp
Average Position of motif in Background49.2 +/- 31.5bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ESRRB/MA0141.3/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GCGAACTTGA
NATGACCTTGA
 A C G T A C T G G A T C C T A G C G T A G T C A A T G C A C G T A C G T A C T G C G T A
C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A

PB0014.1_Esrra_1/Jaspar

Match Rank:2
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----GCGAACTTGA---
NNNNATGACCTTGANTN
 A C G T A C G T A C G T A C G T A C T G G A T C C T A G C G T A G T C A A T G C A C G T A C G T A C T G C G T A A C G T A C G T A C G T
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:3
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:GCGAACTTGA-
-TGACCTTGAN
 A C T G G A T C C T A G C G T A G T C A A T G C A C G T A C G T A C T G C G T A A C G T
A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:4
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GCGAACTTGA-
-TGACCTTGAV
 A C T G G A T C C T A G C G T A G T C A A T G C A C G T A C G T A C T G C G T A A C G T
A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A

Esrra/MA0592.2/Jaspar

Match Rank:5
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GCGAACTTGA-
ATGACCTTGAA
 A C T G G A T C C T A G C G T A G T C A A T G C A C G T A C G T A C T G C G T A A C G T
C G T A A G C T T A C G T G C A T G A C T G A C A G C T A G C T A T C G C T G A T G C A

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GCGAACTTGA
NTGACCTTGA
 A C T G G A T C C T A G C G T A G T C A A T G C A C G T A C G T A C T G C G T A
C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A

Esrrg/MA0643.1/Jaspar

Match Rank:7
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GCGAACTTGA
ATGACCTTGA
 A C T G G A T C C T A G C G T A G T C A A T G C A C G T A C G T A C T G C G T A
C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A

NKX2-8/MA0673.1/Jaspar

Match Rank:8
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GCGAACTTGA-
--CCACTTGAA
 A C T G G A T C C T A G C G T A G T C A A T G C A C G T A C G T A C T G C G T A A C G T
A C G T A C G T T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A

Nr5a2/MA0505.1/Jaspar

Match Rank:9
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GCGAACTTGA----
GCTGACCTTGAACTN
 A C G T A C T G G A T C C T A G C G T A G T C A A T G C A C G T A C G T A C T G C G T A A C G T A C G T A C G T A C G T
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:10
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GCGAACTTGA---
-TGACCTTGACCT
 A C T G G A T C C T A G C G T A G T C A A T G C A C G T A C G T A C T G C G T A A C G T A C G T A C G T
A C G T G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T