Information for 2-CAAGGGACCG (Motif 13)

G T A C T G C A T G C A C T A G C A T G T C A G C G T A T A G C T G A C T A C G
Reverse Opposite:
A T G C A C T G A T C G G C A T A G T C G T A C G A T C A C G T A C G T C A T G
p-value:1e-8
log p-value:-2.048e+01
Information Content per bp:1.664
Number of Target Sequences with motif59.0
Percentage of Target Sequences with motif6.12%
Number of Background Sequences with motif1217.9
Percentage of Background Sequences with motif2.54%
Average Position of motif in Targets55.1 +/- 23.9bp
Average Position of motif in Background50.1 +/- 30.6bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

USF1/MA0093.2/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CAAGGGACCG
GCCACGTGACC-
 A C G T A C G T G T A C T G C A T G C A C T A G C A T G T C A G C G T A T A G C T G A C T A C G
T C A G A G T C G T A C C G T A A G T C T C A G A C G T A C T G C T G A A G T C G A T C A C G T

E-box(bHLH)/Promoter/Homer

Match Rank:2
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CAAGGGACCG-
TCACGTGACCGG
 A C G T G T A C T G C A T G C A C T A G C A T G T C A G C G T A T A G C T G A C T A C G A C G T
A G C T A G T C C G T A A G T C T C A G C G A T A C T G T C G A A T G C T A G C T A C G T A C G

USF2/MA0526.1/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CAAGGGACCG
GTCATGTGACC-
 A C G T A C G T G T A C T G C A T G C A C T A G C A T G T C A G C G T A T A G C T G A C T A C G
T C A G A G C T A G T C C G T A A G C T A C T G A C G T A C T G T C G A A G T C G A T C A C G T

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:4
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CAAGGGACCG
TCCCNNGGGACN-
 A C G T A C G T A C G T G T A C T G C A T G C A C T A G C A T G T C A G C G T A T A G C T G A C T A C G
G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A T A G C G A T C A C G T

PB0137.1_Irf3_2/Jaspar

Match Rank:5
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CAAGGGACCG-
GGAGAAAGGTGCGA
 A C G T A C G T A C G T G T A C T G C A T G C A C T A G C A T G T C A G C G T A T A G C T G A C T A C G A C G T
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CAAGGGACCG
CCAGGAACAG
 G T A C T G C A T G C A C T A G C A T G T C A G C G T A T A G C T G A C T A C G
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G

EBF1/MA0154.3/Jaspar

Match Rank:7
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----CAAGGGACCG
ATTCCCAAGGGAAT-
 A C G T A C G T A C G T A C G T A C G T G T A C T G C A T G C A C T A G C A T G T C A G C G T A T A G C T G A C T A C G
C T G A A C G T G A C T A T G C A G T C A G T C G C T A C G T A T C A G T C A G C A T G C T G A G T C A G A C T A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CAAGGGACCG-----
NNNAAGGGGGCGGGNNN
 A C G T A C G T G T A C T G C A T G C A C T A G C A T G T C A G C G T A T A G C T G A C T A C G A C G T A C G T A C G T A C G T A C G T
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

POL013.1_MED-1/Jaspar

Match Rank:9
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CAAGGGACCG
---CGGAGC-
 G T A C T G C A T G C A C T A G C A T G T C A G C G T A T A G C T G A C T A C G
A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CAAGGGACCG
RTCATGTGAC--
 A C G T A C G T G T A C T G C A T G C A C T A G C A T G T C A G C G T A T A G C T G A C T A C G
T C A G A G C T A T G C C G T A A G C T T C A G C A G T A C T G C T G A A G T C A C G T A C G T