Information for 3-GTGGCTGGGCTCT (Motif 9)

A C T G A G C T A C T G A C T G A G T C A C G T A C T G A C T G A C T G A G T C A C G T A T G C C G A T
Reverse Opposite:
C G T A A T C G C G T A A C T G A G T C A G T C G T A C C G T A A C T G A G T C A G T C C T G A A G T C
p-value:1e-10
log p-value:-2.350e+01
Information Content per bp:1.914
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif6.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets62.0 +/- 24.2bp
Average Position of motif in Background50.5 +/- 25.8bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GTGGCTGGGCTCT
-WDNCTGGGCA--
 A C T G A G C T A C T G A C T G A G T C A C G T A C T G A C T G A C T G A G T C A C G T A T G C C G A T
A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:2
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GTGGCTGGGCTCT
GGGGGCGGGGCC--
 A C G T A C T G A G C T A C T G A C T G A G T C A C G T A C T G A C T G A C T G A G T C A C G T A T G C C G A T
T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T A C G T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:3
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GTGGCTGGGCTCT
CGTGGGTGGTCC--
 A C G T A C T G A G C T A C T G A C T G A G T C A C G T A C T G A C T G A C T G A G T C A C G T A T G C C G A T
A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C A C G T A C G T

POL003.1_GC-box/Jaspar

Match Rank:4
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GTGGCTGGGCTCT
AGGGGGCGGGGCTG-
 A C G T A C G T A C T G A G C T A C T G A C T G A G T C A C G T A C T G A C T G A C T G A G T C A C G T A T G C C G A T
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:5
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----GTGGCTGGGCTCT
NAGANTGGCGGGGNGNA
 A C G T A C G T A C G T A C G T A C T G A G C T A C T G A C T G A G T C A C G T A C T G A C T G A C T G A G T C A C G T A T G C C G A T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

SP2/MA0516.1/Jaspar

Match Rank:6
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----GTGGCTGGGCTCT
GGGNGGGGGCGGGGC---
 A C G T A C G T A C G T A C G T A C G T A C T G A G C T A C T G A C T G A G T C A C G T A C T G A C T G A C T G A G T C A C G T A T G C C G A T
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C A C G T A C G T A C G T

SP1/MA0079.3/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GTGGCTGGGCTCT
GGGGGCGGGGC---
 A C G T A C T G A G C T A C T G A C T G A G T C A C G T A C T G A C T G A C T G A G T C A C G T A T G C C G A T
T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GTGGCTGGGCTCT
--NGCTN------
 A C T G A G C T A C T G A C T G A G T C A C G T A C T G A C T G A C T G A G T C A C G T A T G C C G A T
A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:9
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GTGGCTGGGCTCT
TWGTCTGV-----
 A C T G A G C T A C T G A C T G A G T C A C G T A C T G A C T G A C T G A G T C A C G T A T G C C G A T
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:10
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----GTGGCTGGGCTCT
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T A C G T A C T G A G C T A C T G A C T G A G T C A C G T A C T G A C T G A C T G A G T C A C G T A T G C C G A T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G