Information for 4-AAGCTCTTAATCCCGC (Motif 8)

G T C A C G T A A C T G A G T C A C G T A G T C A G C T A C G T C T G A G T C A A C G T A G T C A G T C A G T C A T C G A G T C
Reverse Opposite:
A C T G A T G C A C T G C T A G A C T G G T C A A C G T A G C T G T C A C T G A A C T G C G T A A C T G A G T C A C G T A C G T
p-value:1e-10
log p-value:-2.438e+01
Information Content per bp:1.908
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.52%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets29.4 +/- 21.9bp
Average Position of motif in Background84.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PITX3/MA0714.1/Jaspar

Match Rank:1
Score:0.65
Offset:5
Orientation:forward strand
Alignment:AAGCTCTTAATCCCGC
-----CTTAATCCC--
 G T C A C G T A A C T G A G T C A C G T A G T C A G C T A C G T C T G A G T C A A C G T A G T C A G T C A G T C A T C G A G T C
A C G T A C G T A C G T A C G T A C G T T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C A C G T A C G T

PH0137.1_Pitx1/Jaspar

Match Rank:2
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:AAGCTCTTAATCCCGC---
--NTTGTTAATCCCTCTNN
 G T C A C G T A A C T G A G T C A C G T A G T C A G C T A C G T C T G A G T C A A C G T A G T C A G T C A G T C A T C G A G T C A C G T A C G T A C G T
A C G T A C G T C G T A C A G T G A C T C A T G G A C T C G A T C G T A C G T A A C G T G A T C A G T C A G T C G A C T A G T C A G C T T G C A C T G A

Pitx1/MA0682.1/Jaspar

Match Rank:3
Score:0.64
Offset:6
Orientation:forward strand
Alignment:AAGCTCTTAATCCCGC
------TTAATCCC--
 G T C A C G T A A C T G A G T C A C G T A G T C A G C T A C G T C T G A G T C A A C G T A G T C A G T C A G T C A T C G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C A C G T A C G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:4
Score:0.63
Offset:5
Orientation:forward strand
Alignment:AAGCTCTTAATCCCGC
-----NYTAATCCYB-
 G T C A C G T A A C T G A G T C A C G T A G T C A G C T A C G T C T G A G T C A A C G T A G T C A G T C A G T C A T C G A G T C
A C G T A C G T A C G T A C G T A C G T A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T A C G T

PH0123.1_Obox3/Jaspar

Match Rank:5
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:AAGCTCTTAATCCCGC---
--ATAGTTAATCCCCCNNA
 G T C A C G T A A C T G A G T C A C G T A G T C A G C T A C G T C T G A G T C A A C G T A G T C A G T C A G T C A T C G A G T C A C G T A C G T A C G T
A C G T A C G T C T G A C A G T G C T A C A T G G C A T G C A T C G T A G T C A C A G T G T A C G A T C G A T C G A T C A T G C A G C T T A G C C G T A

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:6
Score:0.62
Offset:7
Orientation:forward strand
Alignment:AAGCTCTTAATCCCGC
-------TAATCCCN-
 G T C A C G T A A C T G A G T C A C G T A G T C A G C T A C G T C T G A G T C A A C G T A G T C A G T C A G T C A T C G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G A C G T

PH0122.1_Obox2/Jaspar

Match Rank:7
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:AAGCTCTTAATCCCGC---
--ATAGTTAATCCCCCTCA
 G T C A C G T A A C T G A G T C A C G T A G T C A G C T A C G T C T G A G T C A A C G T A G T C A G T C A G T C A T C G A G T C A C G T A C G T A C G T
A C G T A C G T C T G A C A G T G C T A C A T G G C A T G C A T C G T A G C T A C A G T G T A C A G T C G A T C G A T C G A T C A G C T T G A C G C T A

OTX2/MA0712.1/Jaspar

Match Rank:8
Score:0.61
Offset:6
Orientation:forward strand
Alignment:AAGCTCTTAATCCCGC
------TTAATCCT--
 G T C A C G T A A C T G A G T C A C G T A G T C A G C T A C G T C T G A G T C A A C G T A G T C A G T C A G T C A T C G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T A C G T A C G T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:9
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:AAGCTCTTAATCCCGC
------YTAATCCY--
 G T C A C G T A A C T G A G T C A C G T A G T C A G C T A C G T C T G A G T C A A C G T A G T C A G T C A G T C A T C G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T G A T C G C A T C G T A C G T A A C G T G A T C G A T C A G T C A C G T A C G T

PH0130.1_Otx2/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AAGCTCTTAATCCCGC--
-GANNATTAATCCCTNNN
 G T C A C G T A A C T G A G T C A C G T A G T C A G C T A C G T C T G A G T C A A C G T A G T C A G T C A G T C A T C G A G T C A C G T A C G T
A C G T C A T G G T C A G A T C C T G A T C G A G A C T C G A T C G T A C G T A C A G T G A T C A G T C A G T C A G C T G C T A G A T C G T C A