Information for 1-TGGGCACCGG (Motif 5)

A G C T A C T G T C A G A T C G A T G C C T G A A T G C A G T C A T C G A T C G
Reverse Opposite:
A T G C A T G C T C A G T A C G A G C T A T C G T A G C A G T C A G T C C T G A
p-value:1e-10
log p-value:-2.476e+01
Information Content per bp:1.723
Number of Target Sequences with motif94.0
Percentage of Target Sequences with motif9.75%
Number of Background Sequences with motif2225.3
Percentage of Background Sequences with motif4.61%
Average Position of motif in Targets53.2 +/- 28.3bp
Average Position of motif in Background50.4 +/- 29.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0133.1_Hic1_2/Jaspar

Match Rank:1
Score:0.80
Offset:-5
Orientation:reverse strand
Alignment:-----TGGGCACCGG-
NNNNTTGGGCACNNCN
 A C G T A C G T A C G T A C G T A C G T A G C T A C T G T C A G A T C G A T G C C T G A A T G C A G T C A T C G A T C G A C G T
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

HIC2/MA0738.1/Jaspar

Match Rank:2
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--TGGGCACCGG
NGTGGGCAT---
 A C G T A C G T A G C T A C T G T C A G A T C G A T G C C T G A A T G C A G T C A T C G A T C G
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----TGGGCACCGG
WDNCTGGGCA----
 A C G T A C G T A C G T A C G T A G C T A C T G T C A G A T C G A T G C C T G A A T G C A G T C A T C G A T C G
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:4
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----TGGGCACCGG---
NNNNTGAGCACTGTNNG
 A C G T A C G T A C G T A C G T A G C T A C T G T C A G A T C G A T G C C T G A A T G C A G T C A T C G A T C G A C G T A C G T A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

NFIA/MA0670.1/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TGGGCACCGG
NNTTGGCANN--
 A C G T A C G T A G C T A C T G T C A G A T C G A T G C C T G A A T G C A G T C A T C G A T C G
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TGGGCACCGG
TNNGGGCAG---
 A C G T A C G T A G C T A C T G T C A G A T C G A T G C C T G A A T G C A G T C A T C G A T C G
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TGGGCACCGG
GGTTGGCAT---
 A C G T A C G T A G C T A C T G T C A G A T C G A T G C C T G A A T G C A G T C A T C G A T C G
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T A C G T

NRF1/MA0506.1/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TGGGCACCGG-
TGCGCAGGCGC
 A G C T A C T G T C A G A T C G A T G C C T G A A T G C A G T C A T C G A T C G A C G T
A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C

PB0104.1_Zscan4_1/Jaspar

Match Rank:9
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----TGGGCACCGG--
NTNTATGTGCACATNNN
 A C G T A C G T A C G T A C G T A C G T A G C T A C T G T C A G A T C G A T G C C T G A A T G C A G T C A T C G A T C G A C G T A C G T
C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A

NFIX/MA0671.1/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TGGGCACCGG
NTTGGCANN--
 A C G T A G C T A C T G T C A G A T C G A T G C C T G A A T G C A G T C A T C G A T C G
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T