Information for 8-AAGGCCATCTGCG (Motif 20)

C G T A C G T A A C T G A C T G A G T C A G T C C G T A A C G T A G T C A C G T A C T G A G T C A C T G
Reverse Opposite:
A G T C A C T G A G T C C G T A A C T G C G T A A C G T A C T G A C T G A G T C A G T C A C G T A C G T
p-value:1e-6
log p-value:-1.610e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.41%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.5 +/- 28.0bp
Average Position of motif in Background79.7 +/- 8.4bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:1
Score:0.70
Offset:3
Orientation:forward strand
Alignment:AAGGCCATCTGCG
---GCCATCTGTT
 C G T A C G T A A C T G A C T G A G T C A G T C C G T A A C G T A G T C A C G T A C T G A G T C A C T G
A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-AAGGCCATCTGCG---
CCNNACCATCTGGCCTN
 A C G T C G T A C G T A A C T G A C T G A G T C A G T C C G T A A C G T A G T C A C G T A C T G A G T C A C T G A C G T A C G T A C G T
A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:3
Score:0.66
Offset:3
Orientation:forward strand
Alignment:AAGGCCATCTGCG
---ACCATCTGTT
 C G T A C G T A A C T G A C T G A G T C A G T C C G T A A C G T A G T C A C G T A C T G A G T C A C T G
A C G T A C G T A C G T T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:4
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AAGGCCATCTGCG
CAAGGHCANV----
 A C G T C G T A C G T A A C T G A C T G A G T C A G T C C G T A A C G T A G T C A C G T A C T G A G T C A C T G
T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T A C G T A C G T A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:5
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:AAGGCCATCTGCG--
---NVCAGCTGBBNN
 C G T A C G T A A C T G A C T G A G T C A G T C C G T A A C G T A G T C A C G T A C T G A G T C A C T G A C G T A C G T
A C G T A C G T A C G T T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:6
Score:0.61
Offset:3
Orientation:forward strand
Alignment:AAGGCCATCTGCG
---RCCATMTGTT
 C G T A C G T A A C T G A C T G A G T C A G T C C G T A A C G T A G T C A C G T A C T G A G T C A C T G
A C G T A C G T A C G T C T G A T G A C T G A C C G T A A C G T T G A C A G C T C T A G A C G T G A C T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:7
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:AAGGCCATCTGCG--
---GCCAGCTGBTNB
 C G T A C G T A A C T G A C T G A G T C A G T C C G T A A C G T A G T C A C G T A C T G A G T C A C T G A C G T A C G T
A C G T A C G T A C G T T C A G T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G C T T G C A A G T C

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:8
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AAGGCCATCTGCG
NTCAAGGTCA------
 A C G T A C G T A C G T C G T A C G T A A C T G A C T G A G T C A G T C C G T A A C G T A G T C A C G T A C T G A G T C A C T G
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:9
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----AAGGCCATCTGCG
TATTCAAGGTCATGCGA-
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A C T G A G T C A G T C C G T A A C G T A G T C A C G T A C T G A G T C A C T G
C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:10
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AAGGCCATCTGCG
BTCAAGGTCA------
 A C G T A C G T A C G T C G T A C G T A A C T G A C T G A G T C A G T C C G T A A C G T A G T C A C G T A C T G A G T C A C T G
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T