Information for 9-CGGCCTGTGDCACGCA (Motif 18)

A G T C A C T G A C T G A G T C A G T C A C G T A C T G A C G T A C T G C A G T A G T C G T C A A G T C A C T G A G T C C G T A
Reverse Opposite:
A C G T A C T G A G T C A C T G A C G T A C T G G A C T A G T C G T C A A G T C C G T A A C T G A C T G A G T C A G T C A C T G
p-value:1e-8
log p-value:-1.885e+01
Information Content per bp:1.915
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.41%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets33.2 +/- 20.9bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:1
Score:0.60
Offset:7
Orientation:forward strand
Alignment:CGGCCTGTGDCACGCA-
-------TBGCACGCAA
 A G T C A C T G A C T G A G T C A G T C A C G T A C T G A C G T A C T G C A G T A G T C G T C A A G T C A C T G A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:2
Score:0.57
Offset:10
Orientation:reverse strand
Alignment:CGGCCTGTGDCACGCA
----------CACGCA
 A G T C A C T G A C T G A G T C A G T C A C G T A C T G A C G T A C T G C A G T A G T C G T C A A G T C A C T G A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A

Zfx/MA0146.2/Jaspar

Match Rank:3
Score:0.56
Offset:-7
Orientation:forward strand
Alignment:-------CGGCCTGTGDCACGCA
GGGGCCGAGGCCTG---------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C T G A G T C A G T C A C G T A C T G A C G T A C T G C A G T A G T C G T C A A G T C A C T G A G T C C G T A
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:4
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CGGCCTGTGDCACGCA
-NGCCTGAGGCN----
 A G T C A C T G A C T G A G T C A G T C A C G T A C T G A C G T A C T G C A G T A G T C G T C A A G T C A C T G A G T C C G T A
A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G A C G T A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:5
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CGGCCTGTGDCACGCA
AGGCCTAG--------
 A G T C A C T G A C T G A G T C A G T C A C G T A C T G A C G T A C T G C A G T A G T C G T C A A G T C A C T G A G T C C G T A
T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:6
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CGGCCTGTGDCACGCA
-TGCCTGAGGCN----
 A G T C A C T G A C T G A G T C A G T C A C G T A C T G A C G T A C T G C A G T A G T C G T C A A G T C A C T G A G T C C G T A
A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T A C G T A C G T A C G T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:7
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CGGCCTGTGDCACGCA
-TGCCTGCGYCMCCTT
 A G T C A C T G A C T G A G T C A G T C A C G T A C T G A C G T A C T G C A G T A G T C G T C A A G T C A C T G A G T C C G T A
A C G T C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:8
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CGGCCTGTGDCACGCA
-NGCCTNAGGCN----
 A G T C A C T G A C T G A G T C A G T C A C G T A C T G A C G T A C T G C A G T A G T C G T C A A G T C A C T G A G T C C G T A
A C G T G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T A C G T A C G T A C G T A C G T

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:9
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CGGCCTGTGDCACGCA
-RTCATGTGAC-----
 A G T C A C T G A C T G A G T C A G T C A C G T A C T G A C G T A C T G C A G T A G T C G T C A A G T C A C T G A G T C C G T A
A C G T T C A G A G C T A T G C C G T A A G C T T C A G C A G T A C T G C T G A A G T C A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.52
Offset:3
Orientation:forward strand
Alignment:CGGCCTGTGDCACGCA
---GCTGTG-------
 A G T C A C T G A C T G A G T C A G T C A C G T A C T G A C G T A C T G C A G T A G T C G T C A A G T C A C T G A G T C C G T A
A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T