Information for 4-CGTCCTGGCG (Motif 13)

G A T C A T C G G A C T T G A C A T G C A C G T A C T G A T C G A G T C C T A G
Reverse Opposite:
G A T C T C A G A T G C A G T C T G C A A T C G A C T G C T G A T A G C C T A G
p-value:1e-9
log p-value:-2.145e+01
Information Content per bp:1.816
Number of Target Sequences with motif37.0
Percentage of Target Sequences with motif3.84%
Number of Background Sequences with motif554.5
Percentage of Background Sequences with motif1.15%
Average Position of motif in Targets48.1 +/- 28.8bp
Average Position of motif in Background50.0 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC/MA0161.1/Jaspar

Match Rank:1
Score:0.60
Offset:4
Orientation:forward strand
Alignment:CGTCCTGGCG
----TTGGCA
 G A T C A T C G G A C T T G A C A T G C A C G T A C T G A T C G A G T C C T A G
A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CGTCCTGGCG--
---NTTGGCANN
 G A T C A T C G G A C T T G A C A T G C A C G T A C T G A T C G A G T C C T A G A C G T A C G T
A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

YY2/MA0748.1/Jaspar

Match Rank:3
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CGTCCTGGCG---
--TAATGGCGGNC
 G A T C A T C G G A C T T G A C A T G C A C G T A C T G A T C G A G T C C T A G A C G T A C G T A C G T
A C G T A C G T G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:4
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CGTCCTGGCG
CACTTCCTGT--
 A C G T A C G T G A T C A T C G G A C T T G A C A T G C A C G T A C T G A T C G A G T C C T A G
A G T C T C G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A G C T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:5
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CGTCCTGGCG-
--TNNGGGCAG
 G A T C A T C G G A C T T G A C A T G C A C G T A C T G A T C G A G T C C T A G A C G T
A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:6
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CGTCCTGGCG
ACATCCTGNT-
 A C G T G A T C A T C G G A C T T G A C A T G C A C G T A C T G A T C G A G T C C T A G
C T G A A T G C C G T A A C G T A G T C A G T C A C G T A C T G A T C G G C A T A C G T

PB0113.1_E2F3_2/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CGTCCTGGCG-------
NNNNTTGGCGCCGANNN
 G A T C A T C G G A C T T G A C A T G C A C G T A C T G A T C G A G T C C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

PB0164.1_Smad3_2/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CGTCCTGGCG-------
NAGANTGGCGGGGNGNA
 G A T C A T C G G A C T T G A C A T G C A C G T A C T G A T C G A G T C C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:9
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CGTCCTGGCG
CACTTCCTGT--
 A C G T A C G T G A T C A T C G G A C T T G A C A T G C A C G T A C T G A T C G A G T C C T A G
A T G C C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A G C T A C G T A C G T

POL006.1_BREu/Jaspar

Match Rank:10
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:CGTCCTGGCG----
------GGCGCGCT
 G A T C A T C G G A C T T G A C A T G C A C G T A C T G A T C G A G T C C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T