Information for 3-CTGCCCGCGG (Motif 11)

A T G C C G A T A C T G A T G C G T A C A T G C A C T G A T G C T C A G A T C G
Reverse Opposite:
T A G C A G T C T A C G A G T C T A C G A C T G T A C G A G T C G C T A A T C G
p-value:1e-10
log p-value:-2.337e+01
Information Content per bp:1.823
Number of Target Sequences with motif71.0
Percentage of Target Sequences with motif7.37%
Number of Background Sequences with motif1509.5
Percentage of Background Sequences with motif3.13%
Average Position of motif in Targets51.9 +/- 25.3bp
Average Position of motif in Background48.7 +/- 30.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THAP1/MA0597.1/Jaspar

Match Rank:1
Score:0.71
Offset:0
Orientation:forward strand
Alignment:CTGCCCGCGG
CTGCCCGCA-
 A T G C C G A T A C T G A T G C G T A C A T G C A C T G A T G C T C A G A T C G
A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:2
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CTGCCCGCGG---
-TGCCCNGGGGCA
 A T G C C G A T A C T G A T G C G T A C A T G C A C T G A T G C T C A G A T C G A C G T A C G T A C G T
A C G T G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A

TFAP2B/MA0811.1/Jaspar

Match Rank:3
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CTGCCCGCGG---
-TGCCCTNGGGCA
 A T G C C G A T A C T G A T G C G T A C A T G C A C T G A T G C T C A G A T C G A C G T A C G T A C G T
A C G T G A C T T A C G A T G C A G T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A

TFAP2C/MA0524.2/Jaspar

Match Rank:4
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CTGCCCGCGG---
-TGCCCTNGGGCA
 A T G C C G A T A C T G A T G C G T A C A T G C A C T G A T G C T C A G A T C G A C G T A C G T A C G T
A C G T G A C T T A C G A T G C G A T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CTGCCCGCGG----
ANTGCCTGAGGCAAN
 A C G T A T G C C G A T A C T G A T G C G T A C A T G C A C T G A T G C T C A G A T C G A C G T A C G T A C G T A C G T
C G T A C A G T G A C T C A T G G A T C G A T C C A G T T A C G T G C A C A T G C A T G A G T C C G T A G T C A G A C T

HIC2/MA0738.1/Jaspar

Match Rank:6
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CTGCCCGCGG
ATGCCCACC-
 A T G C C G A T A C T G A T G C G T A C A T G C A C T G A T G C T C A G A T C G
T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C A C G T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:7
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CTGCCCGCGG----
ATTGCCTGAGGCAAT
 A C G T A T G C C G A T A C T G A T G C G T A C A T G C A C T G A T G C T C A G A T C G A C G T A C G T A C G T A C G T
G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T

TFAP2A/MA0003.3/Jaspar

Match Rank:8
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CTGCCCGCGG--
-NGCCTGAGGCN
 A T G C C G A T A C T G A T G C G T A C A T G C A C T G A T G C T C A G A T C G A C G T A C G T
A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:9
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CTGCCCGCGG--
-TGCCTGAGGCN
 A T G C C G A T A C T G A T G C G T A C A T G C A C T G A T G C T C A G A T C G A C G T A C G T
A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:10
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CTGCCCGCGG----
ATTCCCTGAGGGGAA
 A C G T A T G C C G A T A C T G A T G C G T A C A T G C A C T G A T G C T C A G A T C G A C G T A C G T A C G T A C G T
C G T A C G A T G A C T A T G C G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A C G C T A G C G T A C T G A