Information for 5-CCTACTCCGA (Motif 11)

A T G C T A G C A C G T T C G A G A T C G C A T T G A C A T G C A T C G C T G A
Reverse Opposite:
G A C T T A G C A T C G A C T G C G T A C A T G A G C T T G C A A T C G T A C G
p-value:1e-9
log p-value:-2.178e+01
Information Content per bp:1.697
Number of Target Sequences with motif59.0
Percentage of Target Sequences with motif6.03%
Number of Background Sequences with motif1149.4
Percentage of Background Sequences with motif2.41%
Average Position of motif in Targets45.1 +/- 25.2bp
Average Position of motif in Background51.3 +/- 31.7bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0114.1_Egr1_2/Jaspar

Match Rank:1
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----CCTACTCCGA-
NNAGTCCCACTCNNNN
 A C G T A C G T A C G T A C G T A C G T A T G C T A G C A C G T T C G A G A T C G C A T T G A C A T G C A T C G C T G A A C G T
T G A C G A T C C G T A C T A G G C A T G T A C G A T C G A T C G T C A A G T C A G C T G A T C T A G C C T A G T G A C T G C A

Dmbx1/MA0883.1/Jaspar

Match Rank:2
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CCTACTCCGA----
NNNATTAATCCGNTTNA
 A C G T A C G T A C G T A T G C T A G C A C G T T C G A G A T C G C A T T G A C A T G C A T C G C T G A A C G T A C G T A C G T A C G T
G C A T C G A T T A G C T G C A G A C T C G A T C G T A C G T A A C G T A T G C A G T C A C T G C A T G G C A T G A C T G A T C C G T A

PH0025.1_Dmbx1/Jaspar

Match Rank:3
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CCTACTCCGA----
NNNATTAATCCGNTTNA
 A C G T A C G T A C G T A T G C T A G C A C G T T C G A G A T C G C A T T G A C A T G C A T C G C T G A A C G T A C G T A C G T A C G T
G C A T C G A T T A G C T G C A G A C T C G A T C G T A C G T A A C G T A T G C A G T C A C T G C A T G G C A T G A C T G A T C C G T A

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:4
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CCTACTCCGA
GCTAATCC--
 A T G C T A G C A C G T T C G A G A T C G C A T T G A C A T G C A T C G C T G A
A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C A C G T A C G T

GSC2/MA0891.1/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CCTACTCCGA
CCTAATCCGC
 A T G C T A G C A C G T T C G A G A T C G C A T T G A C A T G C A T C G C T G A
T G A C G A T C C G A T G C T A G C T A A C G T G T A C A G T C A T C G G A T C

OTX1/MA0711.1/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CCTACTCCGA
-TTAATCCG-
 A T G C T A G C A C G T T C G A G A T C G C A T T G A C A T G C A T C G C T G A
A C G T G A C T G C A T C G T A C G T A C A G T T A G C A T G C A T C G A C G T

GSC/MA0648.1/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CCTACTCCGA
GCTAATCCCC
 A T G C T A G C A C G T T C G A G A T C G C A T T G A C A T G C A T C G C T G A
T A C G G A T C A G C T C T G A C G T A A C G T A G T C A G T C A T G C G A T C

PB0185.1_Tcf1_2/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CCTACTCCGA----
NNTAATCCNGNCNN
 A T G C T A G C A C G T T C G A G A T C G C A T T G A C A T G C A T C G C T G A A C G T A C G T A C G T A C G T
G A T C G T A C G C A T T G C A G T C A G A C T G T A C A G T C T C A G A T C G C T A G A G T C T G C A C G T A

POL013.1_MED-1/Jaspar

Match Rank:9
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CCTACTCCGA
---GCTCCG-
 A T G C T A G C A C G T T C G A G A T C G C A T T G A C A T G C A T C G C T G A
A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T

SP3/MA0746.1/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CCTACTCCGA-
GCCACGCCCCC
 A T G C T A G C A C G T T C G A G A T C G C A T T G A C A T G C A T C G C T G A A C G T
T A C G G T A C G T A C T G C A G A T C C T A G G T A C G T A C A G T C G T A C G A T C