Information for 5-CCGACCTCAC (Motif 9)

G A T C T A G C A C T G C G T A T G A C G T A C G A C T A T G C G C T A T A G C
Reverse Opposite:
A T C G C G A T T A C G C T G A C A T G A C T G G C A T T G A C A T C G C T A G
p-value:1e-9
log p-value:-2.297e+01
Information Content per bp:1.654
Number of Target Sequences with motif52.0
Percentage of Target Sequences with motif5.50%
Number of Background Sequences with motif965.5
Percentage of Background Sequences with motif1.98%
Average Position of motif in Targets47.5 +/- 23.9bp
Average Position of motif in Background48.6 +/- 26.9bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GLI2/MA0734.1/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:forward strand
Alignment:CCGACCTCAC--
GCGACCACACTG
 G A T C T A G C A C T G C G T A T G A C G T A C G A C T A T G C G C T A T A G C A C G T A C G T
C T A G T G A C C A T G T G C A A G T C A T G C G T C A A T G C T G C A G T A C C G A T C T A G

CREB1/MA0018.2/Jaspar

Match Rank:2
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CCGACCTCAC
-TGACGTCA-
 G A T C T A G C A C T G C G T A T G A C G T A C G A C T A T G C G C T A T A G C
A C G T G C A T A C T G C T G A A G T C A T C G A C G T A T G C T C G A A C G T

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:3
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:CCGACCTCAC
---ACGTCA-
 G A T C T A G C A C T G C G T A T G A C G T A C G A C T A T G C G C T A T A G C
A C G T A C G T A C G T C T G A A G T C T C A G A C G T G T A C C G T A A C G T

CRE(bZIP)/Promoter/Homer

Match Rank:4
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CCGACCTCAC
CGGTGACGTCAC
 A C G T A C G T G A T C T A G C A C T G C G T A T G A C G T A C G A C T A T G C G C T A T A G C
A T G C A T C G T A C G A G C T A T C G C T G A A G T C C T A G A G C T A T G C C T G A A T G C

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:5
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CCGACCTCAC
-TGACCTYA-
 G A T C T A G C A C T G C G T A T G A C G T A C G A C T A T G C G C T A T A G C
A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T

Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CCGACCTCAC--
RTGACGTCAYCN
 G A T C T A G C A C T G C G T A T G A C G T A C G A C T A T G C G C T A T A G C A C G T A C G T
T C G A G A C T A C T G C G T A A G T C T C A G G A C T T G A C C T G A A G C T G A T C A T C G

Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CCGACCTCAC--
ATGACGTCAYYN
 G A T C T A G C A C T G C G T A T G A C G T A C G A C T A T G C G C T A T A G C A C G T A C G T
T C G A G C A T A C T G C T G A A G T C T C A G G C A T T G A C C G T A A G C T A G T C T A C G

Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CCGACCTCAC-
-TGACGTCATC
 G A T C T A G C A C T G C G T A T G A C G T A C G A C T A T G C G C T A T A G C A C G T
A C G T G A C T A C T G C T G A A G T C T C A G G A C T T G A C C T G A A G C T A T G C

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:9
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CCGACCTCAC
-TGACCYCT-
 G A T C T A G C A C T G C G T A T G A C G T A C G A C T A T G C G C T A T A G C
A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T

c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CCGACCTCAC--
ATGACGTCATCN
 G A T C T A G C A C T G C G T A T G A C G T A C G A C T A T G C G C T A T A G C A C G T A C G T
T C G A G C A T A C T G C T G A A G T C T C A G G A C T G T A C C G T A A G C T A G T C G A T C