Information for 2-YGGGTGCCRA (Motif 6)

A G T C C A T G C T A G A T C G A G C T A C T G A T G C A G T C T C A G C G T A
Reverse Opposite:
A C G T A G T C T C A G A T C G G T A C T C G A A T G C A G T C G T A C C T A G
p-value:1e-10
log p-value:-2.446e+01
Information Content per bp:1.676
Number of Target Sequences with motif60.0
Percentage of Target Sequences with motif6.35%
Number of Background Sequences with motif1167.4
Percentage of Background Sequences with motif2.39%
Average Position of motif in Targets53.3 +/- 29.3bp
Average Position of motif in Background50.1 +/- 28.1bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIA/MA0670.1/Jaspar

Match Rank:1
Score:0.64
Offset:2
Orientation:forward strand
Alignment:YGGGTGCCRA--
--GGTGCCAAGT
 A G T C C A T G C T A G A T C G A G C T A C T G A T G C A G T C T C A G C G T A A C G T A C G T
A C G T A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T

PB0194.1_Zbtb12_2/Jaspar

Match Rank:2
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:YGGGTGCCRA-----
AGNGTTCTAATGANN
 A G T C C A T G C T A G A T C G A G C T A C T G A T G C A G T C T C A G C G T A A C G T A C G T A C G T A C G T A C G T
G C T A T C A G T A G C C A T G C A G T C A G T G T A C A G C T G C T A G C T A A G C T T A C G C T G A A C G T C G T A

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.58
Offset:2
Orientation:forward strand
Alignment:YGGGTGCCRA-
--CGTGCCAAG
 A G T C C A T G C T A G A T C G A G C T A C T G A T G C A G T C T C A G C G T A A C G T
A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

MTF1/MA0863.1/Jaspar

Match Rank:4
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----YGGGTGCCRA
GTGCCGTGTGCAAA
 A C G T A C G T A C G T A C G T A G T C C A T G C T A G A T C G A G C T A C T G A T G C A G T C T C A G C G T A
C T A G A C G T C T A G G T A C G A T C A C T G A C G T A C T G G A C T A C T G A G T C C G T A T G C A G T C A

E2F1/MA0024.3/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-YGGGTGCCRA-
TTTGGCGCCAAA
 A C G T A G T C C A T G C T A G A T C G A G C T A C T G A T G C A G T C T C A G C G T A A C G T
G C A T C G A T C A G T T C A G A T C G A T G C C T A G A T G C A T G C G C T A G C T A C G T A

PB0044.1_Mtf1_1/Jaspar

Match Rank:6
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----YGGGTGCCRA--
GGGCCGTGTGCAAAAA
 A C G T A C G T A C G T A C G T A G T C C A T G C T A G A T C G A G C T A C T G A T G C A G T C T C A G C G T A A C G T A C G T
C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:YGGGTGCCRA--
RGGGCACTAACY
 A G T C C A T G C T A G A T C G A G C T A C T G A T G C A G T C T C A G C G T A A C G T A C G T
T C G A C A T G C A T G T A C G G T A C T C G A A G T C C A G T C T G A C G T A A G T C G A C T

NFIC/MA0161.1/Jaspar

Match Rank:8
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:YGGGTGCCRA
----TGCCAA
 A G T C C A T G C T A G A T C G A G C T A C T G A T G C A G T C T C A G C G T A
A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--YGGGTGCCRA
CTTGAGTGGCT-
 A C G T A C G T A G T C C A T G C T A G A T C G A G C T A C T G A T G C A G T C T C A G C G T A
A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-YGGGTGCCRA-----
GGGTGTGCCCAAAAGG
 A C G T A G T C C A T G C T A G A T C G A G C T A C T G A T G C A G T C T C A G C G T A A C G T A C G T A C G T A C G T A C G T
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G