Information for 3-CTCCCGGGGAGAG (Motif 3)

A G T C A C G T A T G C G A T C A G T C A T C G A C T G A C T G C T A G C T G A C A T G C T G A A T C G
Reverse Opposite:
T A G C A G C T G A T C A G C T A G T C G T A C A G T C A T G C A C T G C T A G T A C G C G T A A C T G
p-value:1e-13
log p-value:-3.078e+01
Information Content per bp:1.790
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.69%
Number of Background Sequences with motif56.0
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets42.7 +/- 27.2bp
Average Position of motif in Background50.0 +/- 22.1bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0140.1_Irf6_2/Jaspar

Match Rank:1
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----CTCCCGGGGAGAG
ACCACTCTCGGTCAC--
 A C G T A C G T A C G T A C G T A G T C A C G T A T G C G A T C A G T C A T C G A C T G A C T G C T A G C T G A C A T G C T G A A T C G
T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C A C G T A C G T

PB0103.1_Zic3_1/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CTCCCGGGGAGAG
CCCCCCCGGGGGGGT
 A C G T A C G T A G T C A C G T A T G C G A T C A G T C A T C G A C T G A C T G C T A G C T G A C A T G C T G A A T C G
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G T A C G A C T G C A T G C A T G C A T G A T C G A G C T

PB0102.1_Zic2_1/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CTCCCGGGGAGAG
CCCCCCCGGGGGGGT
 A C G T A C G T A G T C A C G T A T G C G A T C A G T C A T C G A C T G A C T G C T A G C T G A C A T G C T G A A T C G
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G A T C G A C T G C A T G C A T G C A T G A T C G A C G T

PB0101.1_Zic1_1/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CTCCCGGGGAGAG
CACCCCCGGGGGGG-
 A C G T A C G T A G T C A C G T A T G C G A T C A G T C A T C G A C T G A C T G C T A G C T G A C A T G C T G A A T C G
A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G A C G T

MZF1/MA0056.1/Jaspar

Match Rank:5
Score:0.63
Offset:4
Orientation:forward strand
Alignment:CTCCCGGGGAGAG
----TGGGGA---
 A G T C A C G T A T G C G A T C A G T C A T C G A C T G A C T G C T A G C T G A C A T G C T G A A T C G
A C G T A C G T A C G T A C G T A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T

PB0204.1_Zfp740_2/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CTCCCGGGGAGAG---
ANTNCCGGGGGGAANTT
 A C G T A G T C A C G T A T G C G A T C A G T C A T C G A C T G A C T G C T A G C T G A C A T G C T G A A T C G A C G T A C G T A C G T
C T G A A G T C G A C T G A C T T A G C A T G C T A C G T A C G A C T G C T A G C T A G C T A G C G T A G T C A G A C T G A C T G A C T

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CTCCCGGGGAGAG
CTTCCNGGAA---
 A G T C A C G T A T G C G A T C A G T C A T C G A C T G A C T G C T A G C T G A C A T G C T G A A T C G
A G T C G A C T C A G T G T A C A G T C A T C G T C A G A C T G G T C A C G T A A C G T A C G T A C G T

PB0138.1_Irf4_2/Jaspar

Match Rank:8
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CTCCCGGGGAGAG
AGTATTCTCGGTTGC--
 A C G T A C G T A C G T A C G T A G T C A C G T A T G C G A T C A G T C A T C G A C T G A C T G C T A G C T G A C A T G C T G A A T C G
T C A G T A C G A G C T G C T A G A C T C A G T G A T C A G C T G A T C T C A G T C A G C G A T G A C T C A T G A T G C A C G T A C G T

PB0139.1_Irf5_2/Jaspar

Match Rank:9
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CTCCCGGGGAGAG
NNAATTCTCGNTNAN--
 A C G T A C G T A C G T A C G T A G T C A C G T A T G C G A T C A G T C A T C G A C T G A C T G C T A G C T G A C A T G C T G A A T C G
A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A A C G T A C G T

Gabpa/MA0062.2/Jaspar

Match Rank:10
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----CTCCCGGGGAGAG
NCCACTTCCGG------
 A C G T A C G T A C G T A C G T A G T C A C G T A T G C G A T C A G T C A T C G A C T G A C T G C T A G C T G A C A T G C T G A A T C G
A C T G A G T C A G T C C T G A A G T C C A G T A C G T A G T C G T A C A C T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T