Information for 4-GGBCHTGCCGGCCGGC (Motif 20)

A C T G A C T G A C G T A G T C G A C T A G C T A T C G A T G C A G T C A C T G A C T G A G T C A G T C A C T G C T A G A G T C
Reverse Opposite:
A C T G A G T C T G A C A C T G A C T G A G T C A G T C A C T G A T C G A T G C T C G A C G T A C T A G T C G A A G T C A G T C
p-value:1e-5
log p-value:-1.364e+01
Information Content per bp:1.816
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.32%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets75.8 +/- 7.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:1
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GGBCHTGCCGGCCGGC
AAGGKGRCGCAGGCA---
 A C G T A C G T A C T G A C T G A C G T A G T C G A C T A G C T A T C G A T G C A G T C A C T G A C T G A G T C A G T C A C T G C T A G A G T C
T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A A C G T A C G T A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:2
Score:0.52
Offset:1
Orientation:forward strand
Alignment:GGBCHTGCCGGCCGGC
-GTCATGCHTGRCTGS
 A C T G A C T G A C G T A G T C G A C T A G C T A T C G A T G C A G T C A C T G A C T G A G T C A G T C A C T G C T A G A G T C
A C G T A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:3
Score:0.52
Offset:8
Orientation:forward strand
Alignment:GGBCHTGCCGGCCGGC
--------AGGCCTAG
 A C T G A C T G A C G T A G T C G A C T A G C T A T C G A T G C A G T C A C T G A C T G A G T C A G T C A C T G C T A G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G

PB0029.1_Hic1_1/Jaspar

Match Rank:4
Score:0.51
Offset:1
Orientation:forward strand
Alignment:GGBCHTGCCGGCCGGC-
-ACTATGCCAACCTACC
 A C T G A C T G A C G T A G T C G A C T A G C T A T C G A T G C A G T C A C T G A C T G A G T C A G T C A C T G C T A G A G T C A C G T
A C G T C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C

Zfx/MA0146.2/Jaspar

Match Rank:5
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--GGBCHTGCCGGCCGGC
CAGGCCNNGGCCNN----
 A C G T A C G T A C T G A C T G A C G T A G T C G A C T A G C T A T C G A T G C A G T C A C T G A C T G A G T C A G T C A C T G C T A G A G T C
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C A C G T A C G T A C G T A C G T

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:GGBCHTGCCGGCCGGC
NGTCACGCTTGGCTGC
 A C T G A C T G A C G T A G T C G A C T A G C T A T C G A T G C A G T C A C T G A C T G A G T C A G T C A C T G C T A G A G T C
C T A G A C T G A G C T A G T C G T C A G A T C T C A G A T G C G C A T G A C T A T C G T C A G T A G C G A C T C T A G T G A C

ESR2/MA0258.2/Jaspar

Match Rank:7
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-GGBCHTGCCGGCCGGC
AGGNCANNGTGACCT--
 A C G T A C T G A C T G A C G T A G T C G A C T A G C T A T C G A T G C A G T C A C T G A C T G A G T C A G T C A C T G C T A G A G T C
C T G A C T A G C T A G C A G T A G T C C G T A A T C G A C T G T A C G G C A T T A C G T G C A G A T C G T A C G A C T A C G T A C G T

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.48
Offset:-2
Orientation:forward strand
Alignment:--GGBCHTGCCGGCCGGC
NAGGTCACNNTGACC---
 A C G T A C G T A C T G A C T G A C G T A G T C G A C T A G C T A T C G A T G C A G T C A C T G A C T G A G T C A G T C A C T G C T A G A G T C
T G C A C T G A C A T G C T A G C A G T A G T C C G T A A T G C A T G C T A C G G C A T T C A G G T C A G A T C G T A C A C G T A C G T A C G T

PB0113.1_E2F3_2/Jaspar

Match Rank:9
Score:0.48
Offset:0
Orientation:reverse strand
Alignment:GGBCHTGCCGGCCGGC-
NNNNTTGGCGCCGANNN
 A C T G A C T G A C G T A G T C G A C T A G C T A T C G A T G C A G T C A C T G A C T G A G T C A G T C A C T G C T A G A G T C A C G T
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

ESR1/MA0112.3/Jaspar

Match Rank:10
Score:0.48
Offset:-2
Orientation:forward strand
Alignment:--GGBCHTGCCGGCCGGC
AAGGTCACGGTGACCTG-
 A C G T A C G T A C T G A C T G A C G T A G T C G A C T A G C T A T C G A T G C A G T C A C T G A C T G A G T C A G T C A C T G C T A G A G T C
C T G A T C G A A C T G C T A G A C G T G A T C C T G A T G A C T A C G T C A G A G C T C T A G T C G A A T G C G T A C A G C T A C T G A C G T