Information for 7-YCSTTGWTTA (Motif 19)

A G T C A T G C A T C G A C G T A C G T C T A G G C T A A C G T A C G T C T G A
Reverse Opposite:
A G C T G T C A C G T A C G A T A G T C C G T A G T C A T A G C A T C G T C A G
p-value:1e-7
log p-value:-1.794e+01
Information Content per bp:1.695
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.48%
Number of Background Sequences with motif99.5
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets56.4 +/- 29.2bp
Average Position of motif in Background46.5 +/- 28.1bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.21
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxj2/MA0614.1/Jaspar

Match Rank:1
Score:0.79
Offset:3
Orientation:reverse strand
Alignment:YCSTTGWTTA-
---TTGTTTAC
 A G T C A T G C A T C G A C G T A C G T C T A G G C T A A C G T A C G T C T G A A C G T
A C G T A C G T A C G T C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C

FOXG1/MA0613.1/Jaspar

Match Rank:2
Score:0.77
Offset:3
Orientation:reverse strand
Alignment:YCSTTGWTTA-
---TTGTTTAC
 A G T C A T G C A T C G A C G T A C G T C T A G G C T A A C G T A C G T C T G A A C G T
A C G T A C G T A C G T C G A T A C G T A C T G A C G T A C G T A C G T C G T A A G T C

FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer

Match Rank:3
Score:0.76
Offset:1
Orientation:forward strand
Alignment:YCSTTGWTTA-
-NVWTGTTTAC
 A G T C A T G C A T C G A C G T A C G T C T A G G C T A A C G T A C G T C T G A A C G T
A C G T A G C T T G A C C G A T C G A T C T A G A C G T C A G T C A G T G C T A A G T C

FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer

Match Rank:4
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:YCSTTGWTTA----
--CBTGTTTAYAWW
 A G T C A T G C A T C G A C G T A C G T C T A G G C T A A C G T A C G T C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A T G C A C G T A C G T C T A G A C G T A C G T A C G T C G T A A G T C G C T A C G A T G C A T

FOXL1/MA0033.2/Jaspar

Match Rank:5
Score:0.74
Offset:4
Orientation:reverse strand
Alignment:YCSTTGWTTA-
----TGTTTAC
 A G T C A T G C A T C G A C G T A C G T C T A G G C T A A C G T A C G T C T G A A C G T
A C G T A C G T A C G T A C G T C A G T C T A G A C G T C A G T A C G T C T G A G A T C

FOXD1/MA0031.1/Jaspar

Match Rank:6
Score:0.74
Offset:3
Orientation:reverse strand
Alignment:YCSTTGWTTA-
---ATGTTTAC
 A G T C A T G C A T C G A C G T A C G T C T A G G C T A A C G T A C G T C T G A A C G T
A C G T A C G T A C G T G C T A A C G T C A T G A C G T A C G T A C G T C G T A A G T C

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:7
Score:0.73
Offset:3
Orientation:reverse strand
Alignment:YCSTTGWTTA-----
---NTGTTTAYATWW
 A G T C A T G C A T C G A C G T A C G T C T A G G C T A A C G T A C G T C T G A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T A C G T C T A G A C G T A C G T A C G T C G T A A G C T T G C A G A C T C G T A C G T A

FOXO3/MA0157.2/Jaspar

Match Rank:8
Score:0.73
Offset:3
Orientation:reverse strand
Alignment:YCSTTGWTTA-
---TTGTTTAC
 A G T C A T G C A T C G A C G T A C G T C T A G G C T A A C G T A C G T C T G A A C G T
A C G T A C G T A C G T G C A T A C G T C A T G A C G T A C G T A C G T G T C A A G T C

Foxj3/MA0851.1/Jaspar

Match Rank:9
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-YCSTTGWTTA------
NNNTTTGTTTACNTTNN
 A C G T A G T C A T G C A T C G A C G T A C G T C T A G G C T A A C G T A C G T C T G A A C G T A C G T A C G T A C G T A C G T A C G T
C A T G A C G T A T C G C G A T C G A T C G A T C T A G C G A T C G A T A C G T C T G A A G T C G A C T G C A T C A G T G A C T C A G T

PB0017.1_Foxj3_1/Jaspar

Match Rank:10
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-YCSTTGWTTA------
NNNTTTGTTTACNTTNN
 A C G T A G T C A T G C A T C G A C G T A C G T C T A G G C T A A C G T A C G T C T G A A C G T A C G T A C G T A C G T A C G T A C G T
C A T G A C G T A T C G C G A T C G A T C G A T C T A G C G A T C G A T A C G T C T G A A G T C G A C T G C A T C A G T G A C T C A G T