Information for 2-GAGAACGGGGGGTCCC (Motif 17)

A C T G C G T A A C T G T C G A C G T A A G T C A C T G A C T G C T A G A C T G A C T G A C T G A C G T A G T C A G T C G T A C
Reverse Opposite:
A C T G A C T G A C T G C G T A A G T C A G T C A G T C A G T C A G T C A G T C C T A G C G A T A C G T A G T C A C G T A G T C
p-value:1e-8
log p-value:-1.898e+01
Information Content per bp:1.887
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.42%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets59.4 +/- 17.0bp
Average Position of motif in Background93.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0156.1_Plagl1_2/Jaspar

Match Rank:1
Score:0.67
Offset:3
Orientation:forward strand
Alignment:GAGAACGGGGGGTCCC----
---GCTGGGGGGTACCCCTT
 A C T G C G T A A C T G T C G A C G T A A G T C A C T G A C T G C T A G A C T G A C T G A C T G A C G T A G T C A G T C G T A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G A G T C G C A T C T A G C A T G A C T G C T A G A C T G A C T G A C G T C T G A G A T C G T A C G T A C G A T C G A C T C G A T

PB0025.1_Glis2_1/Jaspar

Match Rank:2
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:GAGAACGGGGGGTCCC--
--NTNTGGGGGGTCNNNA
 A C T G C G T A A C T G T C G A C G T A A G T C A C T G A C T G C T A G A C T G A C T G A C T G A C G T A G T C A G T C G T A C A C G T A C G T
A C G T A C G T G T A C G A C T T C A G A C G T C T A G C T A G C A T G C A T G A C T G A C T G A C G T T G A C A T C G C G T A C G A T C T G A

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:3
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:GAGAACGGGGGGTCCC
------NRRGGGTCTT
 A C T G C G T A A C T G T C G A C G T A A G T C A C T G A C T G C T A G A C T G A C T G A C T G A C G T A G T C A G T C G T A C
A C G T A C G T A C G T A C G T A C G T A C G T A C T G T C G A C T A G A C T G A C T G A C T G A C G T A G T C A C G T A G C T

ZIC1/MA0696.1/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GAGAACGGGGGGTCCC
CACAGCGGGGGGTC--
 A C T G C G T A A C T G T C G A C G T A A G T C A C T G A C T G C T A G A C T G A C T G A C T G A C G T A G T C A G T C G T A C
T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C A C G T A C G T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:5
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GAGAACGGGGGGTCCC
---CGTGGGTGGTCC-
 A C T G C G T A A C T G T C G A C G T A A G T C A C T G A C T G C T A G A C T G A C T G A C T G A C G T A G T C A G T C G T A C
A C G T A C G T A C G T A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C A C G T

GLIS2/MA0736.1/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GAGAACGGGGGGTCCC
CTTCGCGGGGGGTC--
 A C T G C G T A A C T G T C G A C G T A A G T C A C T G A C T G C T A G A C T G A C T G A C T G A C G T A G T C A G T C G T A C
T A G C C A G T G A C T G A T C T C A G G A T C C T A G C A T G A C T G C T A G C A T G C T A G A G C T T G A C A C G T A C G T

ZIC4/MA0751.1/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GAGAACGGGGGGTCCC
NCNCAGCGGGGGGTC--
 A C G T A C T G C G T A A C T G T C G A C G T A A G T C A C T G A C T G C T A G A C T G A C T G A C T G A C G T A G T C A G T C G T A C
C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C A C G T A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:8
Score:0.57
Offset:4
Orientation:forward strand
Alignment:GAGAACGGGGGGTCCC----
----TTGGGGGCGCCCCTAG
 A C T G C G T A A C T G T C G A C G T A A G T C A C T G A C T G C T A G A C T G A C T G A C T G A C G T A G T C A G T C G T A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:9
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:GAGAACGGGGGGTCCC--
------GGGGATTCCCCC
 A C T G C G T A A C T G T C G A C G T A A G T C A C T G A C T G C T A G A C T G A C T G A C T G A C G T A G T C A G T C G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.57
Offset:7
Orientation:forward strand
Alignment:GAGAACGGGGGGTCCC-
-------GTGGGCCCCA
 A C T G C G T A A C T G T C G A C G T A A G T C A C T G A C T G C T A G A C T G A C T G A C T G A C G T A G T C A G T C G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G G A C T A C T G A C T G C T A G A T G C A G T C A G T C A G T C C T G A