Information for 1-TTBGTGCTGTGAG (Motif 1)

A C G T A C G T A C G T A C T G A C G T A C T G A G T C A C G T C T A G A C G T A C T G C G T A A T C G
Reverse Opposite:
A T G C A C G T A G T C C G T A A G T C C G T A A C T G G T A C C G T A G T A C T C G A C G T A C G T A
p-value:1e-13
log p-value:-3.134e+01
Information Content per bp:1.890
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets41.4 +/- 31.3bp
Average Position of motif in Background24.2 +/- 23.3bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0205.1_Zic1_2/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TTBGTGCTGTGAG-
TNTCCTGCTGTGNNG
 A C G T A C G T A C G T A C G T A C T G A C G T A C T G A G T C A C G T C T A G A C G T A C T G C G T A A T C G A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

PB0207.1_Zic3_2/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TTBGTGCTGTGAG-
NNTCCTGCTGTGNNN
 A C G T A C G T A C G T A C G T A C T G A C G T A C T G A G T C A C G T C T A G A C G T A C T G C G T A A T C G A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.65
Offset:5
Orientation:forward strand
Alignment:TTBGTGCTGTGAG
-----GCTGTG--
 A C G T A C G T A C G T A C T G A C G T A C T G A G T C A C G T C T A G A C G T A C T G C G T A A T C G
A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:4
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TTBGTGCTGTGAG-
TCNCCTGCTGNGNNN
 A C G T A C G T A C G T A C G T A C T G A C G T A C T G A G T C A C G T C T A G A C G T A C T G C G T A A T C G A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

PB0120.1_Foxj1_2/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TTBGTGCTGTGAG--
GTNTTGTTGTGANNT
 A C G T A C G T A C G T A C T G A C G T A C T G A G T C A C G T C T A G A C G T A C T G C G T A A T C G A C G T A C G T
C A T G A G C T T A C G G A C T G C A T A C T G A C G T G A C T C T A G A G C T A C T G T G C A A G T C T C G A C G A T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TTBGTGCTGTGAG
CCCCCTGCTGTG--
 A C G T A C G T A C G T A C G T A C T G A C G T A C T G A G T C A C G T C T A G A C G T A C T G C G T A A T C G
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:TTBGTGCTGTGAG--
---GTGGCGTGACNG
 A C G T A C G T A C G T A C T G A C G T A C T G A G T C A C G T C T A G A C G T A C T G C G T A A T C G A C G T A C G T
A C G T A C G T A C G T T C A G A C G T C A T G A C T G A T G C A T C G A C G T A T C G C T G A A G T C G A T C C A T G

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:TTBGTGCTGTGAG
---ATGGGGTGAT
 A C G T A C G T A C G T A C T G A C G T A C T G A G T C A C G T C T A G A C G T A C T G C G T A A T C G
A C G T A C G T A C G T T C G A A G C T C A T G A C T G A T C G T A C G G A C T A T C G C G T A A G C T

SREBF1/MA0595.1/Jaspar

Match Rank:9
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:TTBGTGCTGTGAG
---GTGGGGTGAT
 A C G T A C G T A C G T A C T G A C G T A C T G A G T C A C G T C T A G A C G T A C T G C G T A A T C G
A C G T A C G T A C G T T C A G A C G T A T C G C T A G A T C G A T C G A C G T A C T G C G T A A G C T

SREBF2/MA0596.1/Jaspar

Match Rank:10
Score:0.59
Offset:3
Orientation:forward strand
Alignment:TTBGTGCTGTGAG
---ATGGGGTGAT
 A C G T A C G T A C G T A C T G A C G T A C T G A G T C A C G T C T A G A C G T A C T G C G T A A T C G
A C G T A C G T A C G T T C G A A C G T A T C G C T A G A T C G T A C G A C G T A C T G C G T A A G C T