Information for 3-ATGCAGGCATTTG (Motif 7)

C G T A A C G T A C T G A G T C T G C A A C T G A C T G A G T C C G T A A C G T A C G T A C G T A C T G
Reverse Opposite:
A G T C C G T A C G T A C G T A A C G T A C T G A G T C G T A C A C G T C T A G A G T C C G T A C G A T
p-value:1e-10
log p-value:-2.428e+01
Information Content per bp:1.940
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.51%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.8 +/- 23.7bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GCM2/MA0767.1/Jaspar

Match Rank:1
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-ATGCAGGCATTTG
TATGCGGGTA----
 A C G T C G T A A C G T A C T G A G T C T G C A A C T G A C T G A G T C C G T A A C G T A C G T A C G T A C T G
A C G T T C G A A G C T T C A G A T G C C A T G A C T G C T A G G A C T C T G A A C G T A C G T A C G T A C G T

PB0024.1_Gcm1_1/Jaspar

Match Rank:2
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----ATGCAGGCATTTG
NNNNATGCGGGTNNNN-
 A C G T A C G T A C G T A C G T C G T A A C G T A C T G A G T C T G C A A C T G A C T G A G T C C G T A A C G T A C G T A C G T A C T G
G T C A C T G A G C A T A C T G T C G A G A C T T C A G A T G C C A T G A C T G A C T G A G C T C G T A A G T C A C T G C G T A A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:ATGCAGGCATTTG
--GCAGTGATTT-
 C G T A A C G T A C T G A G T C T G C A A C T G A C T G A G T C C G T A A C G T A C G T A C G T A C T G
A C G T A C G T C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T A C G T

GCM1/MA0646.1/Jaspar

Match Rank:4
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-ATGCAGGCATTTG
CATGCGGGTAC---
 A C G T C G T A A C G T A C T G A G T C T G C A A C T G A C T G A G T C C G T A A C G T A C G T A C G T A C T G
A G T C T C G A G C A T T C A G G T A C C A T G A C T G A T C G A G C T T C G A A T G C A C G T A C G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:5
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:ATGCAGGCATTTG
-TGCTGTGATTT-
 C G T A A C G T A C T G A G T C T G C A A C T G A C T G A G T C C G T A A C G T A C G T A C G T A C T G
A C G T C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T A C G T

PB0149.1_Myb_2/Jaspar

Match Rank:6
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:ATGCAGGCATTTG----
-NNNTGGCAGTTGGTNN
 C G T A A C G T A C T G A G T C T G C A A C T G A C T G A G T C C G T A A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T C T A G T A G C T C G A G A C T C T A G C T A G A G T C C T G A A C T G A C G T G A C T C T A G T C A G C A G T G T A C T A C G

NEUROG2/MA0669.1/Jaspar

Match Rank:7
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:ATGCAGGCATTTG--
-----GACATATGTT
 C G T A A C G T A C T G A G T C T G C A A C T G A C T G A G T C C G T A A C G T A C G T A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G T C G A A G T C C G T A A C G T T G C A A G C T C T A G A C G T A G C T

Bhlha15/MA0607.1/Jaspar

Match Rank:8
Score:0.54
Offset:6
Orientation:forward strand
Alignment:ATGCAGGCATTTG-
------CCATATGT
 C G T A A C G T A C T G A G T C T G C A A C T G A C T G A G T C C G T A A C G T A C G T A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C G T G T C A A C G T A C T G A G C T

Atoh1/MA0461.2/Jaspar

Match Rank:9
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:ATGCAGGCATTTG--
-----ANCATATGTT
 C G T A A C G T A C T G A G T C T G C A A C T G A C T G A G T C C G T A A C G T A C G T A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A T G C A G T A C G C T A A C G T G T C A A G C T A C T G A C G T A G C T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:10
Score:0.54
Offset:4
Orientation:forward strand
Alignment:ATGCAGGCATTTG-
----TGGCAGTTGG
 C G T A A C G T A C T G A G T C T G C A A C T G A C T G A G T C C G T A A C G T A C G T A C G T A C T G A C G T
A C G T A C G T A C G T A C G T G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G