Information for 3-AARAAGCCGCGGCGGC (Motif 5)

C G T A C G T A C T A G C T G A C G T A A C T G G T A C G T A C A C T G A G T C C A T G A C T G A G T C A C T G A C T G A T G C
Reverse Opposite:
A T C G A G T C A G T C C T A G A G T C G T A C A C T G A G T C A C T G A C T G G T A C A C G T A G C T A G T C A C G T A C G T
p-value:1e-11
log p-value:-2.582e+01
Information Content per bp:1.856
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets34.8 +/- 17.3bp
Average Position of motif in Background74.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NHLH1/MA0048.2/Jaspar

Match Rank:1
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:AARAAGCCGCGGCGGC
----CGCAGCTGCG--
 C G T A C G T A C T A G C T G A C G T A A C T G G T A C G T A C A C T G A G T C C A T G A C T G A G T C A C T G A C T G A T G C
A C G T A C G T A C G T A C G T T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:2
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AARAAGCCGCGGCGGC-
NNNNAGCAGCTGCTGAN
 C G T A C G T A C T A G C T G A C G T A A C T G G T A C G T A C A C T G A G T C C A T G A C T G A G T C A C T G A C T G A T G C A C G T
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:3
Score:0.55
Offset:4
Orientation:forward strand
Alignment:AARAAGCCGCGGCGGC
----AGCAGCTGCTNN
 C G T A C G T A C T A G C T G A C G T A A C T G G T A C G T A C A C T G A G T C C A T G A C T G A G T C A C T G A C T G A T G C
A C G T A C G T A C G T A C G T C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C

ZIC3/MA0697.1/Jaspar

Match Rank:4
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:AARAAGCCGCGGCGGC--
---NCGCAGCGGGGGGTC
 C G T A C G T A C T A G C T G A C G T A A C T G G T A C G T A C A C T G A G T C C A T G A C T G A G T C A C T G A C T G A T G C A C G T A C G T
A C G T A C G T A C G T C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C

Ascl2/MA0816.1/Jaspar

Match Rank:5
Score:0.54
Offset:4
Orientation:forward strand
Alignment:AARAAGCCGCGGCGGC
----AGCAGCTGCT--
 C G T A C G T A C T A G C T G A C G T A A C T G G T A C G T A C A C T G A G T C C A T G A C T G A G T C A C T G A C T G A T G C
A C G T A C G T A C G T A C G T T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T A C G T

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AARAAGCCGCGGCGGC
AGGAAACAGCTG----
 C G T A C G T A C T A G C T G A C G T A A C T G G T A C G T A C A C T G A G T C C A T G A C T G A G T C A C T G A C T G A T G C
T C G A A C T G A C T G C G T A C G T A T C G A A G T C C T G A A T C G G T A C G C A T C A T G A C G T A C G T A C G T A C G T

PB0202.1_Zfp410_2/Jaspar

Match Rank:7
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:AARAAGCCGCGGCGGC----
---NNTNNGGGGCGGNGNGN
 C G T A C G T A C T A G C T G A C G T A A C T G G T A C G T A C A C T G A G T C C A T G A C T G A G T C A C T G A C T G A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C T G A C A G T C G A T G C A T T A C G A C T G T A C G A C T G T G A C T C A G C T A G C T A G C T A G C A G T C T A G T C G A

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:AARAAGCCGCGGCGGC
---CAGCAGCTGN---
 C G T A C G T A C T A G C T G A C G T A A C T G G T A C G T A C A C T G A G T C C A T G A C T G A G T C A C T G A C T G A T G C
A C G T A C G T A C G T T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T A C G T A C G T

ZIC4/MA0751.1/Jaspar

Match Rank:9
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:AARAAGCCGCGGCGGC--
---NCNCAGCGGGGGGTC
 C G T A C G T A C T A G C T G A C G T A A C T G G T A C G T A C A C T G A G T C C A T G A C T G A G T C A C T G A C T G A T G C A C G T A C G T
A C G T A C G T A C G T C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C

PB0010.1_Egr1_1/Jaspar

Match Rank:10
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:AARAAGCCGCGGCGGC
--ANTGCGGGGGCGGN
 C G T A C G T A C T A G C T G A C G T A A C T G G T A C G T A C A C T G A G T C C A T G A C T G A G T C A C T G A C T G A T G C
A C G T A C G T G T C A C T G A G C A T T C A G T G A C C A T G A C T G C T A G A T C G A C T G A G T C C T A G C A T G C T G A